RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	GCK	P35557	465 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PTGDS	P41222	190 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PNLIPRP2	P54317	469 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	LSM11	P83369	360 aa	Known RBP eCLIP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	CRYZ	Q08257	329 aa	Known RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	CASP8	Q14790	479 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	HSPB2	Q16082	182 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	CYP27C1	Q4G0S4	372 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	EIPR1	Q53HC9	387 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	ARL13A	Q5H913	290 aa	Predicted RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	NHSL2	Q5HYW2	709 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	RIPPLY2	Q5TAB7	128 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	KANK2	Q63ZY3	851 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	RNF165	Q6ZSG1	346 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635		Q6ZSR9	355 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PM20D2	Q8IYS1	436 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	ULK2	Q8IYT8	1036 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	CLYBL	Q8N0X4	340 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	WDSUB1	Q8N9V3	476 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	FAM83F	Q8NEG4	500 aa	Predicted RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR2T11	Q8NH01	316 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	TCP10L	Q8TDR4	215 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	ABTB1	Q969K4	478 aa	Predicted RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	ELP4	Q96EB1	424 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	DTNBP1	Q96EV8	351 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	SLC35A4	Q96G79	324 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	EGLN2	Q96KS0	407 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	AMDHD1	Q96NU7	426 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	CCT7	Q99832	543 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	TREX2	Q9BQ50	279 aa	Predicted RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	MECR	Q9BV79	373 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	TMEM109	Q9BVC6	243 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	OSBPL11	Q9BXB4	747 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	TUBB1	Q9H4B7	451 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	GLIPR2	Q9H4G4	154 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	VIPAS39	Q9H9C1	493 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	GALNT9	Q9HCQ5	603 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	KLRF1	Q9NZS2	232 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635		Q9UFV3	132 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	BAIAP2L1	Q9UHR4	511 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	MAPRE3	Q9UPY8	281 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	SLC6A5	Q9Y345	797 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	MRPS18C	Q9Y3D5	142 aa	Known RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	FIS1	Q9Y3D6	152 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR10H1	Q9Y4A9	318 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	DNAJC15	Q9Y5T4	150 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PTGDR2	Q9Y5Y4	395 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PDZD2	O15018	2839 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	TTC36	A6NLP5	189 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	FAM90A27P	A6NNH2	459 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	LSM1	O15116	133 aa	Known RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	AKAP10	O43572	662 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	TBX19	O60806	448 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	SASH3	O75995	380 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ACTL6A	O96019	429 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	CHRNG	P07510	517 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	IFI6	P09912	130 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	BCKDHA	P12694	445 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	CPN1	P15169	458 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	IGFBP2	P18065	325 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	CAPN3	P20807	821 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	MSX1	P28360	303 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	TIMP3	P35625	211 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	SERPINB5	P36952	375 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ADH7	P40394	386 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	MC3R	P41968	323 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ASMT	P46597	345 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	MANF	P55145	182 aa	Known RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	PSG6	Q00889	435 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	TFF3	Q07654	80 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNF155	Q12901	538 aa	Predicted RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	GAB1	Q13480	694 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNHIT3	Q15649	155 aa	Predicted RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	DECR1	Q16698	335 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	SLC25A35	Q3KQZ1	300 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	UGT3A2	Q3SY77	523 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	GALNTL6	Q49A17	601 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ACSF3	Q4G176	576 aa	Predicted RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	RFTN2	Q52LD8	501 aa	Predicted RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	SH2D4B	Q5SQS7	431 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	TMEM107	Q6UX40	140 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	NPSR1	Q6W5P4	371 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	SEM1	Q6ZVN7	128 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNF551	Q7Z340	670 aa	Predicted RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	YRDC	Q86U90	279 aa	Known RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	PLCZ1	Q86YW0	608 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	LIX1L	Q8IVB5	337 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	TRIM42	Q8IWZ5	723 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	DDIAS	Q8IXT1	998 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR2L13	Q8N349	312 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	MREG	Q8N565	214 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR4N2	Q8NGD1	307 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR14L1P	Q8NHC6	308 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	CEP70	Q8NHQ1	597 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZFP28	Q8NHY6	868 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	GFM2	Q969S9	779 aa	Known RBP	6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	PPCDC	Q96CD2	204 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	C14orf79	Q96F83	325 aa		6.3	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNF764	Q96H86	408 aa	Predicted RBP	6.3	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms