RNA–Protein interactions for RNA: ENST00000566663.5

NAE1-216, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 3

Gene NAE1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-216ENST00000566663 OC90Q02509 493 aaPredicted RBP2.36□□□□□ -2.03
NAE1-216ENST00000566663 TLE4Q04727 773 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 YWHAHQ04917 246 aaPredicted RBP2.36□□□□□ -2.03
NAE1-216ENST00000566663 DAZ2Q13117 558 aaKnown RBP2.36□□□□□ -2.03
NAE1-216ENST00000566663 IFI44LQ53G44 452 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 EOGTQ5NDL2 527 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 CWC27Q6UX04 472 aaKnown RBP2.36□□□□□ -2.03
NAE1-216ENST00000566663 CXCL17Q6UXB2 119 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 PARGQ86W56 976 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 CSNK1A1LQ8N752 337 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 DCAF4L2Q8NA75 395 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 NLNQ9BYT8 704 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 DAZ3Q9NR90 486 aaKnown RBP2.36□□□□□ -2.03
NAE1-216ENST00000566663 ZCCHC3Q9NUD5 404 aaKnown RBP2.36□□□□□ -2.03
NAE1-216ENST00000566663 MAD2L2Q9UI95 211 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 ENTPD4Q9Y227 616 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 DHRS7Q9Y394 339 aa2.36□□□□□ -2.03
NAE1-216ENST00000566663 USP6P35125 1406 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 KRTAP4-16G5E9R7 235 aaPredicted RBP2.35□□□□□ -2.03
NAE1-216ENST00000566663 ABCD4O14678 606 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 SNAI2O43623 268 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 TIMP1P01033 207 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 UROSP10746 265 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 NPY2RP49146 381 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 SGSHP51688 502 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 STX1BP61266 288 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 OTUD4Q01804 1114 aaKnown RBP2.35□□□□□ -2.03
NAE1-216ENST00000566663 UBXN1Q04323 297 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 EGFEM1PQ0D2K5 195 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 SCARB2Q14108 478 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 DPYSQ14117 519 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 ZKSCAN8Q15776 578 aaPredicted RBP2.35□□□□□ -2.03
NAE1-216ENST00000566663 CYB5R2Q6BCY4 276 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 ASPHD2Q6ICH7 369 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 B3GLCTQ6Y288 498 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 SYVN1Q86TM6 617 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 PPP1R27Q86WC6 154 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 GOT1L1Q8NHS2 421 aaPredicted RBP2.35□□□□□ -2.03
NAE1-216ENST00000566663 NEIL2Q969S2 332 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 SMIM14Q96QK8 99 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 AKIRIN1Q9H9L7 192 aaPredicted RBP2.35□□□□□ -2.03
NAE1-216ENST00000566663 COPS7BQ9H9Q2 264 aaPredicted RBP2.35□□□□□ -2.03
NAE1-216ENST00000566663 MBD2Q9UBB5 411 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 ONECUT1Q9UBC0 465 aa2.35□□□□□ -2.03
NAE1-216ENST00000566663 IGKV2D-24A0A075B6R9 120 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 ERVV-1B6SEH8 477 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 STSP08842 583 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 FERP16591 822 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 TCF7P36402 384 aaPredicted RBP2.34□□□□□ -2.03
NAE1-216ENST00000566663 TEFQ10587 303 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 ZNF630Q2M218 657 aaPredicted RBP2.34□□□□□ -2.03
NAE1-216ENST00000566663 OR5M10Q6IEU7 315 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 DPY19L2P2Q6ZN68 376 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 ZNF786Q8N393 782 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 ZNF561Q8N587 486 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 TPRX1Q8N7U7 411 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 ZNF397Q8NF99 534 aaPredicted RBP2.34□□□□□ -2.03
NAE1-216ENST00000566663 ANKRD49Q8WVL7 239 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 TMEM37Q8WXS4 190 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 TSPAN18Q96SJ8 248 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 OSBPL8Q9BZF1 889 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 NTN4Q9HB63 628 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 MARCH5Q9NX47 278 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 EHFQ9NZC4 300 aa2.34□□□□□ -2.03
NAE1-216ENST00000566663 ASTN1O14525 1302 aa2.34□□□□□ -2.04
NAE1-216ENST00000566663 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 A0A1W2PQ67 120 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 DHRS7CA6NNS2 312 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 USP27XA6NNY8 438 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 BUB1O43683 1085 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 TBL1XO60907 577 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 ZNF44P15621 663 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 HNRNPA2B1P22626 353 aaKnown RBP2.33□□□□□ -2.04
NAE1-216ENST00000566663 CTNNB1P35222 781 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 NSFP46459 744 aaKnown RBP2.33□□□□□ -2.04
NAE1-216ENST00000566663 GPC3P51654 580 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 RAB35Q15286 201 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 CYP51A1Q16850 503 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 ZNF699Q32M78 642 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 AARDQ4LEZ3 155 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 ARIH2OSQ8N7S6 290 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 MLKLQ8NB16 471 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 COLGALT1Q8NBJ5 622 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 ZNF540Q8NDQ6 660 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 RNASE8Q8TDE3 154 aaKnown RBP2.33□□□□□ -2.04
NAE1-216ENST00000566663 VPS39Q96JC1 886 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 NOL4LQ96MY1 436 aaPredicted RBP2.33□□□□□ -2.04
NAE1-216ENST00000566663 NRTNQ99748 197 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 MIOXQ9UGB7 285 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 PRG3Q9Y2Y8 225 aaPredicted RBP2.33□□□□□ -2.04
NAE1-216ENST00000566663 L3MBTL1Q9Y468 752 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 WSB1Q9Y6I7 421 aa2.33□□□□□ -2.04
NAE1-216ENST00000566663 TMEM110-MUSTN1A8MSY1 372 aa2.32□□□□□ -2.04
NAE1-216ENST00000566663 BBOX1O75936 387 aa2.32□□□□□ -2.04
NAE1-216ENST00000566663 TOXO94900 526 aa2.32□□□□□ -2.04
NAE1-216ENST00000566663 PGK2P07205 417 aa2.32□□□□□ -2.04
NAE1-216ENST00000566663 HTR1FP30939 366 aa2.32□□□□□ -2.04
NAE1-216ENST00000566663 PFN3P60673 137 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms