RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 OR14L1PQ8NHC6 308 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 MBD3L2Q8NHZ7 208 aaPredicted RBP9.12□□□□□ -0.95
CMTM3-209ENST00000565003 AMDHD1Q96NU7 426 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 SH3GL2Q99962 352 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 G6PC3Q9BUM1 346 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 GATA5Q9BWX5 397 aaPredicted RBP9.12□□□□□ -0.95
CMTM3-209ENST00000565003 TUBB1Q9H4B7 451 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 MKS1Q9NXB0 559 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 TAS2R10Q9NYW0 307 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 TAS2R9Q9NYW1 312 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 FLRT3Q9NZU0 649 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 C19orf53Q9UNZ5 99 aaPredicted RBP9.12□□□□□ -0.95
CMTM3-209ENST00000565003 FIS1Q9Y3D6 152 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 OR10H1Q9Y4A9 318 aa9.12□□□□□ -0.95
CMTM3-209ENST00000565003 ANKHD1Q8IWZ3 2542 aaKnown RBP9.12□□□□□ -0.95
CMTM3-209ENST00000565003 DOCK7Q96N67 2140 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 ANKRD17O75179 2603 aaKnown RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 TLDC2A0PJX2 215 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 NPIPB8E9PQR5 432 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 PLOD2O00469 737 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 DVL2O14641 736 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 AZIN1O14977 448 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 SCO2O43819 266 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 SEC22BO75396 215 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 IL2RAP01589 272 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 CHRNGP07510 517 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 CYP4B1P13584 511 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 CPN1P15169 458 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 TCEA1P23193 301 aaKnown RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 GRK2P25098 689 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 SRD5A2P31213 254 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 UQCRC1P31930 480 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 EVI2BP34910 448 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 STARP49675 285 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 ASCL1P50553 236 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 AGFG1P52594 562 aaKnown RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 VSNL1P62760 191 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 PSPHP78330 225 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 SRYQ05066 204 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 TESK1Q15569 626 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 FBXL19-AS1Q494R0 122 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 KANK2Q63ZY3 851 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 ANKRD26P1Q6NSI1 321 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 Q6ZSR9 355 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 TRABD2AQ86V40 505 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 IFNEQ86WN2 208 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 TRIM42Q8IWZ5 723 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 ZZZ3Q8IYH5 903 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 BANPQ8N9N5 519 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 C9orf106Q8NAJ2 232 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 NRGNQ92686 78 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 RNASE6Q93091 150 aaKnown RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 GFM2Q969S9 779 aaKnown RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 CIDECQ96AQ7 238 aaPredicted RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 ELP4Q96EB1 424 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 APOPT1Q96IL0 206 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 FCRL1Q96LA6 429 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 FAM111AQ96PZ2 611 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 TUBA1CQ9BQE3 449 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 MECRQ9BV79 373 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 RTN4RQ9BZR6 473 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 LRTM1Q9HBL6 345 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 DDX18Q9NVP1 670 aaKnown RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 C1orf109Q9NX04 203 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 CRIM1Q9NZV1 1036 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 SLC17A7Q9P2U7 560 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 ZNF629Q9UEG4 869 aaPredicted RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 MID2Q9UJV3 735 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 WBP11Q9Y2W2 641 aaKnown RBP9.11□□□□□ -0.95
CMTM3-209ENST00000565003 DNAJC15Q9Y5T4 150 aa9.11□□□□□ -0.95
CMTM3-209ENST00000565003 TACC2O95359 2948 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 TMEM233B4DJY2 109 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 H0Y3Z8 333 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 SLC28A1O00337 649 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 SYT5O00445 386 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 LSM1O15116 133 aaKnown RBP9.1□□□□□ -0.95
CMTM3-209ENST00000565003 RGS14O43566 566 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 ZIC3O60481 467 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 TRIM13O60858 407 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 CTAG2O75638 210 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 SLITRK5O94991 958 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 ZWINTO95229 277 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 NUDT17P0C025 328 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 LINC00032P0C843 101 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 SDC1P18827 310 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 ALDH3A1P30838 453 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 GCKP35557 465 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 KIR2DL3P43628 341 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 LHX2P50458 406 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 CLDN18P56856 261 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 B3GALT5-AS1P59052 145 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 RPL38P63173 70 aaKnown RBP9.1□□□□□ -0.95
CMTM3-209ENST00000565003 FOXF2Q12947 444 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 HSPB3Q12988 150 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 GAB1Q13480 694 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 RCAN2Q14206 197 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 SF3B4Q15427 424 aaKnown RBP eCLIP9.1□□□□□ -0.95
CMTM3-209ENST00000565003 CYP27C1Q4G0S4 372 aa9.1□□□□□ -0.95
CMTM3-209ENST00000565003 RFTN2Q52LD8 501 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms