RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ELAVL4P26378 380 aaKnown RBP15.33■□□□□ 0.04
LINC00554-201ENST00000564841 IRF8Q02556 426 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 IKZF1Q13422 519 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 MELKQ14680 651 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 OPCMLQ14982 345 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 TMEM201Q5SNT2 666 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 NLRC3Q7RTR2 1065 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 GPR26Q8NDV2 337 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 MOSPD2Q8NHP6 518 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 SLC7A13Q8TCU3 470 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 UBTD2Q8WUN7 234 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 OTULINQ96BN8 352 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 ZFP3Q96NJ6 502 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 NPAS1Q99742 590 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 SLC46A2Q9BY10 475 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 PLA2G12AQ9BZM1 189 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 SEMA3GQ9NS98 782 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 CYB5R1Q9UHQ9 305 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 ENOPH1Q9UHY7 261 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 LSM7Q9UK45 103 aaKnown RBP15.33■□□□□ 0.04
LINC00554-201ENST00000564841 MGAT4DA6NG13 374 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 AHCYP23526 432 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 PTX3P26022 381 aaPredicted RBP15.33■□□□□ 0.04
LINC00554-201ENST00000564841 CCR7P32248 378 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 LBX1P52954 281 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 TPBGQ13641 420 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 XKR6Q5GH73 641 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 PGBD2Q6P3X8 592 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 MSANTD1Q6ZTZ1 278 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 C11orf24Q96F05 449 aaPredicted RBP15.33■□□□□ 0.04
LINC00554-201ENST00000564841 WRAP53Q9BUR4 548 aaKnown RBP15.33■□□□□ 0.04
LINC00554-201ENST00000564841 CACNG6Q9BXT2 260 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 PCDHB16Q9NRJ7 776 aa15.33■□□□□ 0.04
LINC00554-201ENST00000564841 LYARQ9NX58 379 aaKnown RBP15.33■□□□□ 0.04
LINC00554-201ENST00000564841 A0A0B4J203 849 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 KDM4BO94953 1096 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 CXCL2P19875 107 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 GABRA5P31644 462 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 DCST1Q5T197 706 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 TCTN3Q6NUS6 607 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 TNFAIP8L2Q6P589 184 aaPredicted RBP15.32■□□□□ 0.04
LINC00554-201ENST00000564841 RNF165Q6ZSG1 346 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 SIAH3Q8IW03 269 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 RBFAQ8N0V3 343 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 ANKRD53Q8N9V6 530 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 RAB8BQ92930 207 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 HTATIP2Q9BUP3 242 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 SPRTNQ9H040 489 aaPredicted RBP15.32■□□□□ 0.04
LINC00554-201ENST00000564841 EGLN3Q9H6Z9 239 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 ZSCAN32Q9NX65 697 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 PRKAG2Q9UGJ0 569 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 HCFC2Q9Y5Z7 792 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 NPIPB15A6NHN6 443 aaPredicted RBP15.32■□□□□ 0.04
LINC00554-201ENST00000564841 E7EQ34 232 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 MPEG1Q2M385 716 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 SLC36A2Q495M3 483 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 NHLRC3Q5JS37 347 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 CLEC12AQ5QGZ9 265 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 CD276Q5ZPR3 534 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 Q6ZTK2 550 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 HDDC2Q7Z4H3 204 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 FAM9CQ8IZT9 166 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 VPS37AQ8NEZ2 397 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 ELMOD3Q96FG2 381 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 WBP1LQ9NX94 342 aa15.32■□□□□ 0.04
LINC00554-201ENST00000564841 MRPL39Q9NYK5 338 aaKnown RBP15.32■□□□□ 0.04
LINC00554-201ENST00000564841 COL4A4P53420 1690 aaPredicted RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 MEIKINA0A087WXM9 373 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 GLYATL1P3A0A0U1RQE8 302 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 SIX6O95475 246 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 FGBP02675 491 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 HOXB3P14651 431 aaPredicted RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 BLVRAP53004 296 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 GPR85P60893 370 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 GSG1Q2KHT4 349 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 LINC00469Q8N7U9 141 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 GPR32P1Q8NGA4 272 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 OVCA2Q8WZ82 227 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 RC3H2Q9HBD1 1191 aaKnown RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 OR5K4A6NMS3 321 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 NEDD8-MDP1E9PL57 170 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 NMBP08949 121 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 ATP5A1P25705 553 aaKnown RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 LCN1P31025 176 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 EEF1A2Q05639 463 aaKnown RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 LMAN2Q12907 356 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 BAMBIQ13145 260 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 TCTE1Q5JU00 501 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 SFRP4Q6FHJ7 346 aaPredicted RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 RGS7BPQ6MZT1 257 aaPredicted RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 METAP1DQ6UB28 335 aaPredicted RBP15.31■□□□□ 0.04
LINC00554-201ENST00000564841 WASH2PQ6VEQ5 465 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 ARIH2OSQ8N7S6 290 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 C12orf57Q99622 126 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 H2AFJQ9BTM1 129 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 DPAGT1Q9H3H5 408 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 HPF1Q9NWY4 346 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 GPR160Q9UJ42 338 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 ANAPC1Q9H1A4 1944 aa15.31■□□□□ 0.04
LINC00554-201ENST00000564841 H7C0S8 307 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms