RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 TCEA1P23193 301 aaKnown RBP12.73□□□□□ -0.37
CDR2-204ENST00000564542 PNLIPRP2P54317 469 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 GAS1P54826 345 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 DSCR4P56555 118 aaPredicted RBP12.73□□□□□ -0.37
CDR2-204ENST00000564542 ERCC6LQ2NKX8 1250 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 TSNAXIP1Q2TAA8 658 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
CDR2-204ENST00000564542 NPSR1Q6W5P4 371 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 LARP4Q71RC2 724 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDR2-204ENST00000564542 C1orf52Q8N6N3 182 aaKnown RBP12.73□□□□□ -0.37
CDR2-204ENST00000564542 OR4K17Q8NGC6 315 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 ZNF483Q8TF39 744 aaPredicted RBP12.73□□□□□ -0.37
CDR2-204ENST00000564542 PERPQ96FX8 193 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 PGM2Q96G03 612 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 MARK4Q96L34 752 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 SLC39A3Q9BRY0 314 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 OPN3Q9H1Y3 402 aaPredicted RBP12.73□□□□□ -0.37
CDR2-204ENST00000564542 ACSS3Q9H6R3 686 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 ANKRA2Q9H9E1 313 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 PFDN4Q9NQP4 134 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 HEY2Q9UBP5 337 aa12.73□□□□□ -0.37
CDR2-204ENST00000564542 TLN2Q9Y4G6 2542 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 ARID1AO14497 2285 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 SMAD7O15105 426 aaKnown RBP12.72□□□□□ -0.37
CDR2-204ENST00000564542 ESRRBO95718 433 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 PCSK6P29122 969 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 PHBP35232 272 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 KIR2DL2P43627 348 aaPredicted RBP12.72□□□□□ -0.37
CDR2-204ENST00000564542 EEFSECP57772 596 aaKnown RBP12.72□□□□□ -0.37
CDR2-204ENST00000564542 MRPS22P82650 360 aaKnown RBP12.72□□□□□ -0.37
CDR2-204ENST00000564542 FGFBP1Q14512 234 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 RPS27LQ71UM5 84 aaKnown RBP12.72□□□□□ -0.37
CDR2-204ENST00000564542 BTLAQ7Z6A9 289 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 UBQLNLQ8IYU4 475 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 CCDC116Q8IYX3 515 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 SAMD14Q8IZD0 417 aaPredicted RBP12.72□□□□□ -0.37
CDR2-204ENST00000564542 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 FADS6Q8N9I5 356 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 OR9A2Q8NGT5 310 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 ZNF845Q96IR2 970 aaPredicted RBP12.72□□□□□ -0.37
CDR2-204ENST00000564542 HS3ST6Q96QI5 342 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 HBEGFQ99075 208 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 C1QTNF3Q9BXJ4 246 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 FOLH1BQ9HBA9 442 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 PPP4R1LQ9P1A2 415 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 VPS29Q9UBQ0 182 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 TRPS1Q9UHF7 1281 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 MCM8Q9UJA3 840 aa12.72□□□□□ -0.37
CDR2-204ENST00000564542 TRIM64A6NGJ6 449 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 TRIM64BA6NI03 449 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 C17orf51A8MQB3 221 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 KIAA1324LA8MWY0 1029 aaPredicted RBP12.71□□□□□ -0.37
CDR2-204ENST00000564542 C16orf97H3BN30 126 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 PPP6CO00743 305 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 EMC8O43402 210 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 NME6O75414 186 aaPredicted RBP12.71□□□□□ -0.37
CDR2-204ENST00000564542 CGAP01215 116 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 IL3P08700 152 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 CD8BP10966 210 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 HSD3B1P14060 373 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 HSD3B2P26439 372 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 EVI2BP34910 448 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 KCNJ5P48544 419 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 CLDN15P56746 228 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 SIRPAP78324 504 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 GANABQ14697 944 aaKnown RBP12.71□□□□□ -0.37
CDR2-204ENST00000564542 RAET1LQ5VY80 246 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 ZNF550Q7Z398 422 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 PPP1R14CQ8TAE6 165 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 FIG4Q92562 907 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 KAT2AQ92830 837 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 CAVIN3Q969G5 261 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 EFHD2Q96C19 240 aaPredicted RBP12.71□□□□□ -0.37
CDR2-204ENST00000564542 MRPL57Q9BQC6 102 aaKnown RBP12.71□□□□□ -0.37
CDR2-204ENST00000564542 GSX2Q9BZM3 304 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 MRPL46Q9H2W6 279 aaKnown RBP12.71□□□□□ -0.37
CDR2-204ENST00000564542 GRPEL1Q9HAV7 217 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 ZNF175Q9Y473 711 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 OR10H1Q9Y4A9 318 aa12.71□□□□□ -0.37
CDR2-204ENST00000564542 HIVEP2P31629 2446 aa12.71□□□□□ -0.38
CDR2-204ENST00000564542 ESYT3A0FGR9 886 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 LINC01387J3KSC0 135 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 SCO2O43819 266 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 PCDH7O60245 1069 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 PLOD3O60568 738 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 TNFRSF21O75509 655 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 INHBAP08476 426 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 COL6A2P12110 1019 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 TSPAN8P19075 237 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 HK1P19367 917 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 LOXP28300 417 aaPredicted RBP12.7□□□□□ -0.38
CDR2-204ENST00000564542 CDH13P55290 713 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 PPP2R2BQ00005 443 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 CSTF3Q12996 717 aaKnown RBP12.7□□□□□ -0.38
CDR2-204ENST00000564542 GUSBP1Q15486 140 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 FAM219BQ5XKK7 198 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 SLC44A2Q8IWA5 706 aaPredicted RBP12.7□□□□□ -0.38
CDR2-204ENST00000564542 OR2M3Q8NG83 312 aa12.7□□□□□ -0.38
CDR2-204ENST00000564542 OR4N2Q8NGD1 307 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms