RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SDK2Q58EX2 2172 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 A0A0G2JPF8 293 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 HNRNPCL2B2RXH8 293 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 HNRNPCL3B7ZW38 293 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 STX11O75558 287 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 H6PDO95479 791 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 SERPINA1P01009 418 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 GPIP06744 558 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 GUSBP08236 651 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 HNRNPCL4P0DMR1 293 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 LIFP15018 202 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 ETS2P15036 469 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 DRD5P21918 477 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 IL12BP29460 328 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 AQP1P29972 269 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 MAP3K8P41279 467 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 TMED10P49755 219 aaKnown RBP11.88□□□□□ -0.51
CLK3-214ENST00000564096 GPR143P51810 404 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 RNF4P78317 190 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 ELF3P78545 371 aaPredicted RBP11.88□□□□□ -0.51
CLK3-214ENST00000564096 MRPS22P82650 360 aaKnown RBP11.88□□□□□ -0.51
CLK3-214ENST00000564096 PSG6Q00889 435 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 MS4A2Q01362 244 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 PLCXD2Q0VAA5 305 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 NNATQ16517 81 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 SYPL1Q16563 259 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 ZFP1Q6P2D0 407 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 SPPL2CQ8IUH8 684 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 ZNF321PQ8N8H1 164 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 ANKFN1Q8N957 763 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 SLC22A8Q8TCC7 542 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 SPPL2AQ8TCT8 520 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 WDR60Q8WVS4 1066 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 KCNE4Q8WWG9 221 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 PIK3R3Q92569 461 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 PMM1Q92871 262 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 TP53INP1Q96A56 240 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 SLC35A4Q96G79 324 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 FER1L6-AS2Q96M78 137 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 DEFB126Q9BYW3 111 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 ZNF350Q9GZX5 532 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 OLAHQ9NV23 265 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 P4HTMQ9NXG6 502 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 DTX4Q9Y2E6 619 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 GPR55Q9Y2T6 319 aaPredicted RBP11.88□□□□□ -0.51
CLK3-214ENST00000564096 WDR45Q9Y484 360 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 PTPRBP23467 1997 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 WDR87Q6ZQQ6 2873 aa11.88□□□□□ -0.51
CLK3-214ENST00000564096 DHRS12A0PJE2 317 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 TO15178 435 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 SUV39H1O43463 412 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 HS6ST1O60243 411 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 KIAA0513O60268 411 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 PGM3O95394 542 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 ZNF682O95780 498 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 ALPPP05187 535 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 C8BP07358 591 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 CHRM4P08173 479 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 CT45A8P0DMV1 189 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 CT45A9P0DMV2 189 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 UMPSP11172 480 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 F8A1P23610 371 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 LCN1P31025 176 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 KDELR2P33947 212 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 PIGAP37287 484 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 RFX3P48380 749 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 PCBP3P57721 371 aaKnown RBP11.87□□□□□ -0.51
CLK3-214ENST00000564096 FUT5Q11128 374 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 ATP1A4Q13733 1029 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLK3-214ENST00000564096 CT45A2Q5DJT8 189 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 CRB2Q5IJ48 1285 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 RPS26P11Q5JNZ5 115 aaPredicted RBP11.87□□□□□ -0.51
CLK3-214ENST00000564096 IRAK1BP1Q5VVH5 260 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 NPSR1Q6W5P4 371 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 ARMC8Q8IUR7 673 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 KBTBD2Q8IY47 623 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 PEX5LQ8IYB4 626 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 SLC34A3Q8N130 599 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 ZNF619Q8N2I2 560 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 SLC5A8Q8N695 610 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 ZNF248Q8NDW4 579 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 OIT3Q8WWZ8 545 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 FGF11Q92914 225 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 IMMP1LQ96LU5 166 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 UGT2B28Q9BY64 529 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 YY1AP1Q9H869 796 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 SEC14L3Q9UDX4 400 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 IL17BQ9UHF5 180 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 ANAPC2Q9UJX6 822 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 SLC13A4Q9UKG4 626 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 BAG5Q9UL15 447 aa11.87□□□□□ -0.51
CLK3-214ENST00000564096 MRPS18BQ9Y676 258 aaKnown RBP11.87□□□□□ -0.51
CLK3-214ENST00000564096 DSPPQ9NZW4 1301 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 CROCCQ5TZA2 2017 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 TCRBV3S1A0A5B6 114 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 CDC14CA4D256 554 aa11.86□□□□□ -0.51
CLK3-214ENST00000564096 ZNF891A8MT65 544 aaPredicted RBP11.86□□□□□ -0.51
CLK3-214ENST00000564096 A8MUI8 341 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms