RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 SHISA3A0PJX4 238 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 HMGN4O00479 90 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 TCRBP04435 133 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 OR12D1P0DN82 309 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 SOX9P48436 509 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 MANFP55145 182 aaKnown RBP17.53■□□□□ 0.4
BBS4-204ENST00000562084 TBPL1P62380 186 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 TSPAN31Q12999 210 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 ZNF267Q14586 743 aaPredicted RBP17.53■□□□□ 0.4
BBS4-204ENST00000562084 SHHQ15465 462 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 TRAM1Q15629 374 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 TAF12Q16514 161 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 EOGTQ5NDL2 527 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 TMCO2Q7Z6W1 182 aaPredicted RBP17.53■□□□□ 0.4
BBS4-204ENST00000562084 OR11H4Q8NGC9 324 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 BBS10Q8TAM1 723 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 RBPMSQ93062 196 aaKnown RBP17.53■□□□□ 0.4
BBS4-204ENST00000562084 GSX2Q9BZM3 304 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 NUDT15Q9NV35 164 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 NPTNQ9Y639 398 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 CSNK1G3Q9Y6M4 447 aa17.53■□□□□ 0.4
BBS4-204ENST00000562084 HELZP42694 1942 aaKnown RBP17.53■□□□□ 0.4
BBS4-204ENST00000562084 GTPBP1O00178 669 aaKnown RBP17.52■□□□□ 0.4
BBS4-204ENST00000562084 SCO1O75880 301 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 LALBAP00709 142 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 NPPBP16860 134 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 F8A1P23610 371 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 DNASE1P24855 282 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 BMP8BP34820 402 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 SOX18P35713 384 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 SLC11A1P49279 550 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 GBX2P52951 348 aaPredicted RBP17.52■□□□□ 0.4
BBS4-204ENST00000562084 CAMK2DQ13557 499 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 FGFBP1Q14512 234 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 SPDYE7PQ495Y7 208 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 CCSMST1Q4G0I0 132 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 IDNKQ5T6J7 187 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 GARNL3Q5VVW2 1013 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 NXPE4Q6UWF7 544 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 ASB18Q6ZVZ8 466 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 BMP8AQ7Z5Y6 402 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 CMIPQ8IY22 773 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 ZFP41Q8N8Y5 198 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 SLC5A11Q8WWX8 675 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 SMPDL3AQ92484 453 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 VOPP1Q96AW1 172 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 ERMAPQ96PL5 475 aaPredicted RBP17.52■□□□□ 0.4
BBS4-204ENST00000562084 SECISBP2Q96T21 854 aaKnown RBP17.52■□□□□ 0.4
BBS4-204ENST00000562084 TMEM175Q9BSA9 504 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 DPCDQ9BVM2 203 aaPredicted RBP17.52■□□□□ 0.4
BBS4-204ENST00000562084 MED9Q9NWA0 146 aa17.52■□□□□ 0.4
BBS4-204ENST00000562084 ZNF624Q9P2J8 865 aaPredicted RBP17.52■□□□□ 0.4
BBS4-204ENST00000562084 RANBP2P49792 3224 aaKnown RBP17.52■□□□□ 0.4
BBS4-204ENST00000562084 GREM1O60565 184 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 ITGA10O75578 1167 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 POP4O95707 220 aaKnown RBP17.52■□□□□ 0.39
BBS4-204ENST00000562084 ZP3P21754 424 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 FRKP42685 505 aaPredicted RBP17.52■□□□□ 0.39
BBS4-204ENST00000562084 PRLHRP49683 370 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 ZNF81P51508 661 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 PITPNAQ00169 270 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 LMAN2Q12907 356 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 GNA13Q14344 377 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 LGALSLQ3ZCW2 172 aaPredicted RBP17.52■□□□□ 0.39
BBS4-204ENST00000562084 AADACL4Q5VUY2 407 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 BAIAP2L2Q6UXY1 529 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 TMEM91Q6ZNR0 172 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 LHFPL3Q86UP9 236 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 ZNF480Q8WV37 535 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 TREX2Q9BQ50 279 aaPredicted RBP17.52■□□□□ 0.39
BBS4-204ENST00000562084 RSPO3Q9BXY4 272 aaPredicted RBP17.52■□□□□ 0.39
BBS4-204ENST00000562084 SERHL2Q9H4I8 314 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 ANKRD19PQ9H560 264 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 BCL2L10Q9HD36 194 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 PTGFRNQ9P2B2 879 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 RABL2AQ9UBK7 228 aaPredicted RBP17.52■□□□□ 0.39
BBS4-204ENST00000562084 GLS2Q9UI32 602 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 RABL2BQ9UNT1 228 aa17.52■□□□□ 0.39
BBS4-204ENST00000562084 CCDC88CQ9P219 2028 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 SLC9A3R1O14745 358 aaPredicted RBP17.51■□□□□ 0.39
BBS4-204ENST00000562084 KHNYNO15037 678 aaKnown RBP17.51■□□□□ 0.39
BBS4-204ENST00000562084 LRRTM2O43300 516 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 RNF13O43567 381 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 HTR1FP30939 366 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 ANXA11P50995 505 aaKnown RBP17.51■□□□□ 0.39
BBS4-204ENST00000562084 RPS26P62854 115 aaKnown RBP17.51■□□□□ 0.39
BBS4-204ENST00000562084 PUDPQ08623 228 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 CDC73Q6P1J9 531 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 C22orf39Q6P5X5 142 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 ZNF322Q6U7Q0 402 aaPredicted RBP17.51■□□□□ 0.39
BBS4-204ENST00000562084 SLC9B2Q86UD5 537 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 NPAS4Q8IUM7 802 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 FIBINQ8TAL6 211 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 OSTF1Q92882 214 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 ZNF649Q9BS31 505 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 LRFN2Q9ULH4 789 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 BACE2Q9Y5Z0 518 aa17.51■□□□□ 0.39
BBS4-204ENST00000562084 CD8B2A6NJW9 211 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 AGRPO00253 132 aa17.5■□□□□ 0.39
BBS4-204ENST00000562084 SAP18O00422 153 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms