RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 ZNF629Q9UEG4 869 aaPredicted RBP9.36□□□□□ -0.91
CLK3-205ENST00000561673 FBXL2Q9UKC9 423 aa9.36□□□□□ -0.91
CLK3-205ENST00000561673 C19orf53Q9UNZ5 99 aaPredicted RBP9.36□□□□□ -0.91
CLK3-205ENST00000561673 L3MBTL1Q9Y468 752 aa9.36□□□□□ -0.91
CLK3-205ENST00000561673 OR10H1Q9Y4A9 318 aa9.36□□□□□ -0.91
CLK3-205ENST00000561673 WIF1Q9Y5W5 379 aa9.36□□□□□ -0.91
CLK3-205ENST00000561673 HCFC1P51610 2035 aa9.36□□□□□ -0.91
CLK3-205ENST00000561673 A0A087WV62 115 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 CD8B2A6NJW9 211 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 C17orf51A8MQB3 221 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 B4DXG7 233 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 NPIPB8E9PQR5 432 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 PLOD2O00469 737 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 DVL2O14641 736 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 AZIN1O14977 448 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 TRIM13O60858 407 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 COQ9O75208 318 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 PSMG1O95456 288 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 LINC00032P0C843 101 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 CPN1P15169 458 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 PRPH2P23942 346 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 NTSP30990 170 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 UQCRC1P31930 480 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 KRT20P35900 424 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 ZNF136P52737 540 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 GFRA1P56159 465 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 PSPHP78330 225 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 SRYQ05066 204 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 ZNF155Q12901 538 aaPredicted RBP9.35□□□□□ -0.91
CLK3-205ENST00000561673 MYBPHQ13203 477 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 GAB1Q13480 694 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 PCLAFQ15004 111 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 Q6ZSR9 355 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 IKBIPQ70UQ0 350 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 CDH24Q86UP0 819 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 TRIM42Q8IWZ5 723 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 OR2L13Q8N349 312 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 BANPQ8N9N5 519 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 OR2T11Q8NH01 316 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 ZPLD1Q8TCW7 415 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 GFM2Q969S9 779 aaKnown RBP9.35□□□□□ -0.91
CLK3-205ENST00000561673 OR2B2Q9GZK3 357 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 TUBB1Q9H4B7 451 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 LRTM1Q9HBL6 345 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 C1orf109Q9NX04 203 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 FIS1Q9Y3D6 152 aa9.35□□□□□ -0.91
CLK3-205ENST00000561673 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 MBD3L5A6NJ08 208 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 RGS14O43566 566 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 ZIC3O60481 467 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 SLITRK5O94991 958 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 CHRNGP07510 517 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 CYP4B1P13584 511 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 GRK2P25098 689 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 ALDH3A1P30838 453 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 SRD5A2P31213 254 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 EVI2BP34910 448 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 GCKP35557 465 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 KIR2DL3P43628 341 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 STARP49675 285 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 LHX2P50458 406 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 ASCL1P50553 236 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 AGFG1P52594 562 aaKnown RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 VSNL1P62760 191 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 MRPS22P82650 360 aaKnown RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 TESK1Q15569 626 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 CYP27C1Q4G0S4 372 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 RFTN2Q52LD8 501 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 SH2D4BQ5SQS7 431 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 ANKRD26P1Q6NSI1 321 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 ENPP6Q6UWR7 440 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 PLXDC2Q6UX71 529 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 RNF165Q6ZSG1 346 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 ZNF551Q7Z340 670 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 TRABD2AQ86V40 505 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 IFNEQ86WN2 208 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 ZZZ3Q8IYH5 903 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 C9orf106Q8NAJ2 232 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 CIDECQ96AQ7 238 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 APOPT1Q96IL0 206 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 SH3GL2Q99962 352 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 TUBA1CQ9BQE3 449 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 TRMOQ9BU70 441 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 G6PC3Q9BUM1 346 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 MECRQ9BV79 373 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 DDX18Q9NVP1 670 aaKnown RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 MKS1Q9NXB0 559 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 FLRT3Q9NZU0 649 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 SLC17A7Q9P2U7 560 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 BAIAP2L1Q9UHR4 511 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 MID2Q9UJV3 735 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 CBLCQ9ULV8 474 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 MRPS18CQ9Y3D5 142 aaKnown RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 DNAJC15Q9Y5T4 150 aa9.34□□□□□ -0.91
CLK3-205ENST00000561673 MAP1AP78559 2803 aaPredicted RBP9.34□□□□□ -0.91
CLK3-205ENST00000561673 HIVEP1P15822 2718 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 TEP1Q99973 2627 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms