RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 LHX4Q969G2 390 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SLC35C1Q96A29 364 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 MRPL24Q96A35 216 aaKnown RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 TMEM143Q96AN5 459 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 FAM131CQ96AQ9 280 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 NXPE2Q96DL1 559 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 TIMD4Q96H15 378 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 PCED1BQ96HM7 432 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 IGSF21Q96ID5 467 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 NSMCE3Q96MG7 304 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ERGIC2Q96RQ1 377 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 TSG101Q99816 390 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 WDR77Q9BQA1 342 aaPredicted RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 SLC30A2Q9BRI3 323 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 LLPHQ9BRT6 129 aaKnown RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 CCM2Q9BSQ5 444 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 CNPY3Q9BT09 278 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 APOOQ9BUR5 198 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 DUSP26Q9BV47 211 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 OSBPL10Q9BXB5 764 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 API5Q9BZZ5 524 aaKnown RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 CENPHQ9H3R5 247 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 LRRN3Q9H3W5 708 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 GOLPH3Q9H4A6 298 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 FBXO44Q9H4M3 255 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ANKRA2Q9H9E1 313 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 FKRPQ9H9S5 495 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ELL3Q9HB65 397 aaPredicted RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 RAVER2Q9HCJ3 691 aaKnown RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 MLXIPLQ9NP71 852 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 NT5MQ9NPB1 228 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ADAP2Q9NPF8 381 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SLC52A3Q9NQ40 469 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SLC17A5Q9NRA2 495 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SMOXQ9NWM0 555 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 AHSPQ9NZD4 102 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SLC7A8Q9UHI5 535 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ZNF639Q9UID6 485 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 TINAGQ9UJW2 476 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 PACSIN3Q9UKS6 424 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 POMT2Q9UKY4 750 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 VANGL2Q9ULK5 521 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 PADI3Q9ULW8 664 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 TMCO1Q9UM00 188 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 MYO6Q9UM54 1294 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 DDX19BQ9UMR2 479 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 COPS3Q9UNS2 423 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 EIF3LQ9Y262 564 aaKnown RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 RASD1Q9Y272 281 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 VDAC3Q9Y277 283 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 STARD10Q9Y365 291 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 WIPI2Q9Y4P8 454 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 SELENOKQ9Y6D0 94 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 ZMYM6O95789 1325 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 PDS5AQ29RF7 1337 aaKnown RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 WDR17Q8IZU2 1322 aa1.85□□□□□ -2.11
RTF1-207ENST00000561076 BRD4O60885 1362 aaPredicted RBP1.85□□□□□ -2.11
RTF1-207ENST00000561076 CC2D2AQ9P2K1 1620 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TRBV5-3A0A0A0MS03 114 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 A0A0G2JNG1 304 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 C1orf232A0A0U1RR37 186 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 A0A1B0GUH1 482 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 IQCMA0A1B0GVH7 501 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 A0A1W2PP11 408 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RPS10-NUDT3A0A1W2PQS6 291 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TMEM120BA0PK00 339 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ZNF840PA6NDX5 716 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 C5orf60A6NFR6 353 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FBLL1A6NHQ2 334 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 OR6C65A6NJZ3 312 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SHISA7A6NL88 538 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 GABRR3A8MPY1 467 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 H0YL77 283 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 M0R3G1 203 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 BTN3A3O00478 584 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TRAFD1O14545 582 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 NBR2O15453 112 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RGS16O15492 202 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 RRP8O43159 456 aaKnown RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 LDB2O43679 373 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SULT1B1O43704 296 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 TLX3O43711 291 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 HCN1O60741 890 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 HUS1O60921 280 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 WDR1O75083 606 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 RFPL2O75678 378 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ATP5HO75947 161 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ATP5LO75964 103 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 PDE5AO76074 875 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CDK14O94921 469 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 LCA5LO95447 670 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 SNAI1O95863 264 aaPredicted RBP1.84□□□□□ -2.11
RTF1-207ENST00000561076 CST1P01037 141 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 IFNA2P01563 188 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 ATP1B1P05026 303 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 FCER2P06734 321 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CRYGBP07316 175 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 CLTAP09496 248 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 H2BFMP0C1H6 154 aa1.84□□□□□ -2.11
RTF1-207ENST00000561076 OCMP0CE72 109 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms