RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 SLC38A1Q9H2H9 487 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 SOX17Q9H6I2 414 aaPredicted RBP8□□□□□ -1.13
TRAF3-209ENST00000560463 RUBCNLQ9H714 662 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 EVA1AQ9H8M9 152 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 CACYBPQ9HB71 228 aaKnown RBP8□□□□□ -1.13
TRAF3-209ENST00000560463 Q9N2J8 555 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 IL1RAPQ9NPH3 570 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 SEC14L3Q9UDX4 400 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF232Q9UNY5 417 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 GPR55Q9Y2T6 319 aaPredicted RBP8□□□□□ -1.13
TRAF3-209ENST00000560463 IFT52Q9Y366 437 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 WDR45Q9Y484 360 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 KCNE3Q9Y6H6 103 aa8□□□□□ -1.13
TRAF3-209ENST00000560463 LOC102723996A0A087X1L8 192 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 SPAARA0A1B0GVQ0 90 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 A8MUA0 341 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 HRKO00198 91 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 SLC30A4O14863 429 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CLOCKO15516 846 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 DPM1O60762 260 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 KLF7O75840 302 aaPredicted RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PRSS23O95084 383 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CST1P01037 141 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 LDLRP01130 860 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CAPNS1P04632 268 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ALPPP05187 535 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 DBIP07108 87 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 FESP07332 822 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 THBS1P07996 1170 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CHRM4P08173 479 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PABPC4LP0CB38 370 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CT45A8P0DMV1 189 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CT45A9P0DMV2 189 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ITGA2P17301 1181 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 DRD5P21918 477 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CD82P27701 267 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 GABRA3P34903 492 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PIGAP37287 484 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 KCNJ5P48544 419 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 GPR143P51810 404 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PSMD4P55036 377 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 KCNJ10P78508 379 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 NHLH1Q02575 133 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 KCNC4Q03721 635 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 TARDBPQ13148 414 aaKnown RBP eCLIP7.99□□□□□ -1.132e-7■■■■□ 26.4
TRAF3-209ENST00000560463 TRIP10Q15642 601 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ATP6AP1Q15904 470 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ZSWIM7Q19AV6 140 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CYP27C1Q4G0S4 372 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CT45A2Q5DJT8 189 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 OGFRL1Q5TC84 451 aaPredicted RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 HLA-DQA1Q5Y7H0 255 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 TYW3Q6IPR3 259 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 LCN10Q6JVE6 187 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 IGF2-ASQ6U949 168 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 FRRS1Q6ZNA5 592 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 SHISA6Q6ZSJ9 500 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 LANCL3Q6ZV70 420 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CPEB2Q7Z5Q1 589 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 VTCN1Q7Z7D3 282 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PEX5LQ8IYB4 626 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PRSS58Q8IYP2 241 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF619Q8N2I2 560 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 OR8K3Q8NH51 312 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 FAM110BQ8TC76 370 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 SPPL2AQ8TCT8 520 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ADAMTS14Q8WXS8 1223 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PROX1Q92786 737 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 TP53INP1Q96A56 240 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 HSPBAP1Q96EW2 488 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 VPS50Q96JG6 964 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 LCORQ96JN0 433 aaPredicted RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 C7orf34Q96L11 122 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF354BQ96LW1 612 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 COL21A1Q96P44 957 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF347Q96SE7 839 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 LPAR4Q99677 370 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 OR8D2Q9GZM6 311 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF350Q9GZX5 532 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 ARMC7Q9H6L4 198 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 AKIRIN1Q9H9L7 192 aaPredicted RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 POLR1BQ9H9Y6 1135 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 C8orf4Q9NR00 106 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 THSD1Q9NS62 852 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 RYDENQ9NUL5 291 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 DNAJB9Q9UBS3 223 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 MRTO4Q9UKD2 239 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 CNOT11Q9UKZ1 510 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 DTX4Q9Y2E6 619 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 PTRH2Q9Y3E5 179 aaKnown RBP7.99□□□□□ -1.13
TRAF3-209ENST00000560463 KIAA1549Q9HCM3 1950 aa7.99□□□□□ -1.13
TRAF3-209ENST00000560463 C2orf92A0A1B0GVN3 265 aa7.98□□□□□ -1.13
TRAF3-209ENST00000560463 A0A1W2PNU3 283 aaPredicted RBP7.98□□□□□ -1.13
TRAF3-209ENST00000560463 A0A1W2PQ72 361 aa7.98□□□□□ -1.13
TRAF3-209ENST00000560463 FRG2CA6NGY1 282 aa7.98□□□□□ -1.13
TRAF3-209ENST00000560463 C21orf140B9A014 251 aa7.98□□□□□ -1.13
TRAF3-209ENST00000560463 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.98□□□□□ -1.13
TRAF3-209ENST00000560463 SYT5O00445 386 aa7.98□□□□□ -1.13
TRAF3-209ENST00000560463 GNGT2O14610 69 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms