RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TBC1D3FA6NER0 549 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3LB9A6J9 549 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 H0Y8X5 98 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ASNA1O43681 348 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 SNX4O95219 450 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 SLC2A10O95528 541 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 LALBAP00709 142 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3HP0C7X1 549 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 CCNYL3P0C7X3 344 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ACP2P11117 423 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ACADMP11310 421 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 CPEP16870 476 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 MYL12AP19105 171 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 MPIP34949 423 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 OMPP47874 163 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 WNT4P56705 351 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ABATP80404 500 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TGM3Q08188 693 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TRAM2Q15035 370 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3GQ6DHY5 549 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3CQ6IPX1 549 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF425Q6IV72 752 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 FBXO46Q6PJ61 603 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 PARM1Q6UWI2 310 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 GDPGP1Q6ZNW5 385 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 LHFPL3Q86UP9 236 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3Q8IZP1 549 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 SLC16A11Q8NCK7 471 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ANKK1Q8NFD2 765 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 FLCNQ8NFG4 579 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 BBS1Q8NFJ9 593 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 OR4F15Q8NGB8 312 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 CDS1Q92903 461 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 FGF14Q92915 247 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ARSGQ96EG1 525 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 C1GALT1C1Q96EU7 318 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 MYADMQ96S97 322 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 RAB11FIP5Q9BXF6 653 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 CMAHPQ9Y471 501 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF780BQ9Y6R6 833 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 XIRP2A4UGR9 3374 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 SCN3AQ9NY46 2000 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 REV3LO60673 3130 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 POM121BA6NF01 834 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 K7EQS6 105 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 PRODHO43272 600 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 GUCY1B2O75343 617 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 APOA1P02647 267 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 GSTM3P21266 225 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TEAD1P28347 426 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 SDC2P34741 201 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 RCVRNP35243 200 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ANXA11P50995 505 aaKnown RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 RGS8P57771 180 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ID2Q02363 134 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 ENPP2Q13822 863 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 GNA13Q14344 377 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 C3orf38Q5JPI3 329 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 SLC25A30Q5SVS4 291 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 CCNJQ5T5M9 372 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 NXNL2Q5VZ03 156 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TYW3Q6IPR3 259 aaKnown RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 PLEKHM3Q6ZWE6 761 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 MTSS1LQ765P7 747 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 NRROSQ86YC3 692 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TMEFF1Q8IYR6 380 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 LINC00471Q8N535 108 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 OR52P1PQ8NH57 321 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TMEM255BQ8WV15 326 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 LCN9Q8WX39 176 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 SLC25A46Q96AG3 418 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 C10orf90Q96M02 699 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 DCLRE1CQ96SD1 692 aaKnown RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 CCDC32Q9BV29 185 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 MARCH7Q9H992 704 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 OBP2AQ9NY56 170 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 PLEKHB1Q9UF11 243 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TRAPPC4Q9Y296 219 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 LINC01565O15544 149 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 P2RX6O15547 441 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 LIMS3P0CW19 117 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 LIMS4P0CW20 117 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 NR2F6P10588 404 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 COL9A1P20849 921 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 SSTR4P31391 388 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 MTNR1AP48039 350 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 RFX2P48378 723 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 ADPRHP54922 357 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 SIM1P81133 766 aaPredicted RBP9.4□□□□□ -0.91
LRRC28-216ENST00000559819 RUNX1T1Q06455 604 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 TSPAN31Q12999 210 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 INSL4Q14641 139 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 CRTC2Q53ET0 693 aaPredicted RBP9.4□□□□□ -0.91
LRRC28-216ENST00000559819 KLHL22Q53GT1 634 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 B3GLCTQ6Y288 498 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 FRRS1Q6ZNA5 592 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 GDF7Q7Z4P5 450 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 LAPTM4BQ86VI4 370 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 AMIGO1Q86WK6 493 aa9.4□□□□□ -0.91
LRRC28-216ENST00000559819 PAQR7Q86WK9 346 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms