RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 PCBP3P57721 371 aaKnown RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 FLOT2Q14254 428 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 DCST2Q5T1A1 773 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 PRAMEF8Q5VWM4 474 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 PRAMEF7Q5VXH5 474 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 DHFR2Q86XF0 187 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 OR5L2Q8NGL0 311 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 TP53INP1Q96A56 240 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 RMND5BQ96G75 393 aaPredicted RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 SDF2Q99470 211 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 TREX2Q9BQ50 279 aaPredicted RBP16.73■□□□□ 0.27
CLPX-203ENST00000558958 RUBCNLQ9H714 662 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 BCL2L10Q9HD36 194 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 CBLCQ9ULV8 474 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 ANGPT4Q9Y264 503 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 OR10H1Q9Y4A9 318 aa16.73■□□□□ 0.27
CLPX-203ENST00000558958 MASP2O00187 686 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 TO15178 435 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 KCNK2O95069 426 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 PGM3O95394 542 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 H6PDO95479 791 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 ATP6V1B2P21281 511 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 PIGAP37287 484 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 NR0B1P51843 470 aaKnown RBP16.72■□□□□ 0.27
CLPX-203ENST00000558958 MRPS22P82650 360 aaKnown RBP16.72■□□□□ 0.27
CLPX-203ENST00000558958 Q0VFX4 171 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 CYP27C1Q4G0S4 372 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 GPAT3Q53EU6 434 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 INTS11Q5TA45 600 aaKnown RBP16.72■□□□□ 0.27
CLPX-203ENST00000558958 LCN8Q6JVE9 175 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 LRRC74BQ6ZQY2 392 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 CCDC80Q76M96 950 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 FAM110BQ8TC76 370 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 DEFB126Q9BYW3 111 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 DPH1Q9BZG8 443 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 SLC38A1Q9H2H9 487 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 DENND2DQ9H6A0 471 aaPredicted RBP16.72■□□□□ 0.27
CLPX-203ENST00000558958 LIN28AQ9H9Z2 209 aaKnown RBP16.72■□□□□ 0.27
CLPX-203ENST00000558958 CALML5Q9NZT1 146 aa16.72■□□□□ 0.27
CLPX-203ENST00000558958 CDC14CA4D256 554 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 ACOX3O15254 700 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 ZIC2O95409 532 aaPredicted RBP16.71■□□□□ 0.27
CLPX-203ENST00000558958 STAMBPO95630 424 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 SERPINA7P05543 415 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 AQP1P29972 269 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 KDELR2P33947 212 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 POLE2P56282 527 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 PSPHP78330 225 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 KPNB1Q14974 876 aaKnown RBP16.71■□□□□ 0.27
CLPX-203ENST00000558958 CRTC2Q53ET0 693 aaPredicted RBP16.71■□□□□ 0.27
CLPX-203ENST00000558958 RPS26P11Q5JNZ5 115 aaPredicted RBP16.71■□□□□ 0.27
CLPX-203ENST00000558958 DCAF10Q5QP82 559 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 CCNJQ5T5M9 372 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 ATP1A1-AS1Q5TC04 95 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 AP1ARQ63HQ0 302 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 CYP2R1Q6VVX0 501 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 OLIG3Q7RTU3 272 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 SPPL2CQ8IUH8 684 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 BCORP1Q8N888 145 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 OR52E4Q8NGH9 312 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 THAP3Q8WTV1 239 aaPredicted RBP16.71■□□□□ 0.27
CLPX-203ENST00000558958 HSPBAP1Q96EW2 488 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 ZNF350Q9GZX5 532 aa16.71■□□□□ 0.27
CLPX-203ENST00000558958 A0A0G2JPF8 293 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 HNRNPCL2B2RXH8 293 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 HNRNPCL3B7ZW38 293 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 NKX2-8O15522 239 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 FCMRO60667 390 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 STX11O75558 287 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 IGKV1D-16P01601 117 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 GUSBP08236 651 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 HNRNPCL4P0DMR1 293 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 ITGAMP11215 1152 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 CRYBA2P53672 197 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 ACTR3P61158 418 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 HPCAP84074 193 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 DECR1Q16698 335 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 CRB2Q5IJ48 1285 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 TCTN3Q6NUS6 607 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 FIGNL1Q6PIW4 674 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 FRRS1Q6ZNA5 592 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 C16orf47Q6ZP98 133 aaPredicted RBP16.7■□□□□ 0.26
CLPX-203ENST00000558958 PATL1Q86TB9 770 aaKnown RBP16.7■□□□□ 0.26
CLPX-203ENST00000558958 KBTBD2Q8IY47 623 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 BHLHE22Q8NFJ8 381 aaPredicted RBP16.7■□□□□ 0.26
CLPX-203ENST00000558958 BBS10Q8TAM1 723 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 THAP4Q8WY91 577 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 FAM162AQ96A26 154 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 NSMCE2Q96MF7 247 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 LMF1Q96S06 567 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 TRIM15Q9C019 465 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 SAP130Q9H0E3 1048 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 POLE3Q9NRF9 147 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 FBXO34Q9NWN3 711 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 MYOTQ9UBF9 498 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 RRP15Q9Y3B9 282 aaKnown RBP16.7■□□□□ 0.26
CLPX-203ENST00000558958 CACNA1AO00555 2505 aa16.7■□□□□ 0.26
CLPX-203ENST00000558958 DSPPQ9NZW4 1301 aa16.69■□□□□ 0.26
CLPX-203ENST00000558958 ZNF891A8MT65 544 aaPredicted RBP16.69■□□□□ 0.26
CLPX-203ENST00000558958 A8MUI8 341 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms