RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 UPK1AO00322 258 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 ADAM10O14672 748 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 ICOSLGO75144 302 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 ERLIN1O75477 346 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 ETV4P43268 484 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 PPICP45877 212 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 MANFP55145 182 aaKnown RBP10.98□□□□□ -0.65
TPM1-216ENST00000558910 NUP107P57740 925 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 ABCE1P61221 599 aaKnown RBP10.98□□□□□ -0.65
TPM1-216ENST00000558910 PTGR1Q14914 329 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 ATP6AP1LQ52LC2 224 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 EMC4Q5J8M3 183 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 WIPI1Q5MNZ9 446 aaPredicted RBP10.98□□□□□ -0.65
TPM1-216ENST00000558910 IL23RQ5VWK5 629 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 MTFR2Q6P444 385 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 BNC2Q6ZN30 1099 aaPredicted RBP10.98□□□□□ -0.65
TPM1-216ENST00000558910 RGS9BPQ6ZS82 235 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 DND1Q8IYX4 353 aaKnown RBP10.98□□□□□ -0.65
TPM1-216ENST00000558910 ZNF808Q8N4W9 903 aaPredicted RBP10.98□□□□□ -0.65
TPM1-216ENST00000558910 KRTCAP2Q8N6L1 136 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 OR1J4Q8NGS1 313 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 FAM76AQ8TAV0 307 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 ZNF675Q8TD23 568 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 CA5BP1Q8WTZ4 195 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 PIK3R3Q92569 461 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 SLC9A6Q92581 669 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 JADE3Q92613 823 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 HGDQ93099 445 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 HSPBAP1Q96EW2 488 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 COL21A1Q96P44 957 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 UCK2Q9BZX2 261 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 REEP4Q9H6H4 257 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 SIRT5Q9NXA8 310 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 TAS2R9Q9NYW1 312 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 FLRT3Q9NZU0 649 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 CAMK2AQ9UQM7 478 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 GPR55Q9Y2T6 319 aaPredicted RBP10.98□□□□□ -0.65
TPM1-216ENST00000558910 SNX8Q9Y5X2 465 aa10.98□□□□□ -0.65
TPM1-216ENST00000558910 GXYLT2A0PJZ3 443 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 NKX2-6A6NCS4 301 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 E9PLN8 166 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 COQ9O75208 318 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 TRIM3O75382 744 aaPredicted RBP10.97□□□□□ -0.65
TPM1-216ENST00000558910 BCAS2O75934 225 aaPredicted RBP10.97□□□□□ -0.65
TPM1-216ENST00000558910 SERPINE1P05121 402 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 FGF4P08620 206 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 CT45A8P0DMV1 189 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 CT45A9P0DMV2 189 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 KITP10721 976 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 CYP4B1P13584 511 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 ENDOUP21128 410 aaKnown RBP10.97□□□□□ -0.65
TPM1-216ENST00000558910 DRD5P21918 477 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 GABRA3P34903 492 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 HPCAL1P37235 193 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 SLC1A6P48664 564 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 NME5P56597 212 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 MAGOHP61326 146 aaKnown RBP10.97□□□□□ -0.65
TPM1-216ENST00000558910 DCAF7P61962 342 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 SRYQ05066 204 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 GAB1Q13480 694 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 PGS1Q32NB8 556 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 CT45A2Q5DJT8 189 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 WLSQ5T9L3 541 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 RPTNQ6XPR3 784 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 IKBIPQ70UQ0 350 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 NUP54Q7Z3B4 507 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.97□□□□□ -0.65
TPM1-216ENST00000558910 GPR151Q8TDV0 419 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 TMCO6Q96DC7 493 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 ELP4Q96EB1 424 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 PPP3R2Q96LZ3 170 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 VSTM2LQ96N03 204 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 CCT7Q99832 543 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 VKORC1Q9BQB6 163 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 ANGPTL4Q9BY76 406 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 C20orf27Q9GZN8 174 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 TP63Q9H3D4 680 aaPredicted RBP10.97□□□□□ -0.65
TPM1-216ENST00000558910 PNPOQ9NVS9 261 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 COQ3Q9NZJ6 369 aa10.97□□□□□ -0.65
TPM1-216ENST00000558910 MARCOQ9UEW3 520 aaPredicted RBP10.97□□□□□ -0.65
TPM1-216ENST00000558910 RPH3AQ9Y2J0 694 aaPredicted RBP10.97□□□□□ -0.65
TPM1-216ENST00000558910 NCKAP5O14513 1909 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 A0A1W2PNR3 127 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 KDM4EB2RXH2 506 aaPredicted RBP10.96□□□□□ -0.65
TPM1-216ENST00000558910 TMEM114B3SHH9 223 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 ACOX3O15254 700 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 CFLARO15519 480 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 PLOD3O60568 738 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 CLDN14O95500 239 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 IGHG3P01860 377 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 LAMP1P11279 417 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 PRPH2P23942 346 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 ACVR2AP27037 513 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 MAPK1P28482 360 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 SOAT1P35610 550 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 PTGDSP41222 190 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 GSTM5P46439 218 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 MAP2K3P46734 347 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 STX3Q13277 289 aa10.96□□□□□ -0.65
TPM1-216ENST00000558910 ZNHIT3Q15649 155 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms