RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 OR51E2Q9H255 320 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 A0A0U1RQF3 1178 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 GGT3PA6NGU5 568 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 HAPLN1P10915 354 aaPredicted RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 RFC2P35250 354 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 GABARAPL2P60520 117 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ERV3-1Q14264 604 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ZNF765Q7L2R6 523 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ZNF679Q8IYX0 411 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 FEVQ99581 238 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 TCEAL2Q9H3H9 227 aaPredicted RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 SPHK2Q9NRA0 654 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ASB6Q9NWX5 421 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 RNF186Q9NXI6 227 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 RAB19A4D1S5 217 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 DIRAS3O95661 229 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 CNR2P34972 360 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 HACD2Q6Y1H2 254 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 TP53INP2Q8IXH6 220 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 SYT14Q8NB59 555 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 SLC45A3Q96JT2 553 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 MFFQ9GZY8 342 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 MED16Q9Y2X0 877 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 CDK2P24941 298 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 COQ5Q5HYK3 327 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 TTC9BQ8N6N2 239 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ZNF436Q9C0F3 470 aaPredicted RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 HCFC1R1Q9NWW0 138 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 VDAC3Q9Y277 283 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 CACNA1FO60840 1977 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 CSNK2A1P68400 391 aaPredicted RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 HNF4GQ14541 408 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 SPATS1Q496A3 300 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 ERN2Q76MJ5 926 aaKnown RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 CSNK2A3Q8NEV1 391 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 SORBS1Q9BX66 1292 aaKnown RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 CWH43Q9H720 699 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 RANGRFQ9HD47 186 aaPredicted RBP13.26□□□□□ -0.29
SPG11-210ENST00000558319 TMEM100Q9NV29 134 aa13.26□□□□□ -0.29
SPG11-210ENST00000558319 HHLA1C9JL84 531 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 TBPL1P62380 186 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 SLC22A10Q63ZE4 541 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 ASPGQ86U10 573 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 METTL4Q8N3J2 472 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 OR4K13Q8NH42 304 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 CPNE5Q9HCH3 593 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 IL37Q9NZH6 218 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 CA5BQ9Y2D0 317 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 MAGED1Q9Y5V3 778 aaPredicted RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 NFKBIEO00221 500 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 PRKYO43930 277 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 RIDAP52758 137 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 MEX3BQ6ZN04 569 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 CDHR3Q6ZTQ4 885 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 TERB2Q8NHR7 220 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 ZDHHC12Q96GR4 267 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 CNN2Q99439 309 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 TINAGL1Q9GZM7 467 aaPredicted RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 TMEM181Q9P2C4 612 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 PFKLP17858 780 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 C3orf38Q5JPI3 329 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 KCTD18Q6PI47 426 aaPredicted RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 LIX1LQ8IVB5 337 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 OR4C15Q8NGM1 316 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 BBS10Q8TAM1 723 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 METTL2AQ96IZ6 378 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 SLC25A18Q9H1K4 315 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 MRM3Q9HC36 420 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 TXNL4BQ9NX01 149 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 SLCO3A1Q9UIG8 710 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 MEIOCA2RUB1 952 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 ARGFXA6NJG6 315 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 BHLHE40O14503 412 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 LCMT2O60294 686 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 STC1P52823 247 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 CDKN2DP55273 166 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 ACTC1P68032 377 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 ACTA1P68133 377 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 ACY1Q03154 408 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 NSDHLQ15738 373 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 HIST2H3PS2Q5TEC6 136 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 LEG1Q6P5S2 330 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 OR9Q2Q8NGE9 314 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 NT5C3BQ969T7 300 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 DPH7Q9BTV6 452 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 OR51J1Q9H342 316 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 DMAC2Q9NW81 257 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 RPS21P63220 83 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 EIF2B1Q14232 305 aaKnown RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 TMEM150AQ86TG1 271 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 RCBTB1Q8NDN9 531 aa13.25□□□□□ -0.29
SPG11-210ENST00000558319 ZNF419Q96HQ0 510 aaPredicted RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 ZNF514Q96K75 400 aaPredicted RBP13.25□□□□□ -0.29
SPG11-210ENST00000558319 MYH6P13533 1939 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 SULT1C2O00338 296 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 DNAJB5O75953 348 aa13.24□□□□□ -0.29
SPG11-210ENST00000558319 OAS1P00973 400 aaKnown RBP13.24□□□□□ -0.29
SPG11-210ENST00000558319 MTNR1AP48039 350 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms