RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MFRPQ9BY79 579 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 EFCAB1Q9HAE3 211 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 ARL8BQ9NVJ2 186 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 GID8Q9NWU2 228 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 MRTO4Q9UKD2 239 aaKnown RBP19.6■□□□□ 0.73
CASC4-204ENST00000557945 PCDHGB3Q9Y5G1 929 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 CSAG2Q9Y5P2 127 aa19.6■□□□□ 0.73
CASC4-204ENST00000557945 TRBV5-3A0A0A0MS03 114 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 CDK2AP1O14519 115 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 DPM1O60762 260 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 PPM1BO75688 479 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 SOX30O94993 753 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 PPIBP23284 216 aaKnown RBP19.59■□□□□ 0.73
CASC4-204ENST00000557945 IL12BP29460 328 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 PIGAP37287 484 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 FBXW4P57775 412 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 POU6F2P78424 691 aaPredicted RBP19.59■□□□□ 0.73
CASC4-204ENST00000557945 MRPS22P82650 360 aaKnown RBP19.59■□□□□ 0.73
CASC4-204ENST00000557945 ART3Q13508 389 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 ZNF791Q3KP31 576 aaPredicted RBP19.59■□□□□ 0.73
CASC4-204ENST00000557945 RUNDC3AQ59EK9 446 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 FAM91A1Q658Y4 838 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 FIGNL1Q6PIW4 674 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 BCORP1Q8N888 145 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 OR52N2Q8NGI0 321 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 XAGE5Q8WWM1 108 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 RAB8BQ92930 207 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 EFHD2Q96C19 240 aaPredicted RBP19.59■□□□□ 0.73
CASC4-204ENST00000557945 LRRC58Q96CX6 371 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 SIGLEC12Q96PQ1 595 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 ADOQ96SZ5 270 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 BTBD2Q9BX70 525 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 RAD21L1Q9H4I0 556 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 RYDENQ9NUL5 291 aaKnown RBP19.59■□□□□ 0.73
CASC4-204ENST00000557945 GIN1Q9NXP7 522 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 TAGLN3Q9UI15 199 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 KCNE3Q9Y6H6 103 aa19.59■□□□□ 0.73
CASC4-204ENST00000557945 EVPLLA8MZ36 301 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 ETFAP13804 333 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 NAGAP17050 411 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 CPA2P48052 419 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 NUDT2P50583 147 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 TNFSF10P50591 281 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 ATAD3BQ5T9A4 648 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 PCSK4Q6UW60 755 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 RTL4Q6ZR62 310 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 C16orf62Q7Z3J2 963 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 DND1Q8IYX4 353 aaKnown RBP19.58■□□□□ 0.73
CASC4-204ENST00000557945 WBP1Q96G27 269 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 ANKRD27Q96NW4 1050 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 COL21A1Q96P44 957 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 UBL7Q96S82 380 aaPredicted RBP19.58■□□□□ 0.73
CASC4-204ENST00000557945 CPPED1Q9BRF8 314 aaPredicted RBP19.58■□□□□ 0.73
CASC4-204ENST00000557945 SLC39A3Q9BRY0 314 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 THUMPD3Q9BV44 507 aaKnown RBP19.58■□□□□ 0.73
CASC4-204ENST00000557945 SLC25A18Q9H1K4 315 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 EXD2Q9NVH0 621 aa19.58■□□□□ 0.73
CASC4-204ENST00000557945 ASNA1O43681 348 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 SLC25A12O75746 678 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 KCNK2O95069 426 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 AGR2O95994 175 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 NPPAP01160 153 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 MAGEA8P43361 318 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 MVDP53602 400 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 PSMD4P55036 377 aaKnown RBP19.57■□□□□ 0.72
CASC4-204ENST00000557945 MTPNP58546 118 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TXNL4AP83876 142 aaKnown RBP19.57■□□□□ 0.72
CASC4-204ENST00000557945 KRT72Q14CN4 511 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 NTRK2Q16620 822 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 CCNJQ5T5M9 372 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TRPM8Q7Z2W7 1104 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 GALNT10Q86SR1 603 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 RBMXL3Q8N7X1 1067 aaKnown RBP19.57■□□□□ 0.72
CASC4-204ENST00000557945 OR10G3Q8NGC4 313 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TMEM125Q96AQ2 219 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 SGCZQ96LD1 299 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 C5orf34Q96MH7 638 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TRIM8Q9BZR9 551 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TRIM45Q9H8W5 580 aaPredicted RBP19.57■□□□□ 0.72
CASC4-204ENST00000557945 CORO2BQ9UQ03 480 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TRAV17A0A0B4J275 112 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 HMGN4O00479 90 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TP53I11O14683 189 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TSPAN2O60636 221 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 UGT2B11O75310 529 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 NEURL1O76050 574 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 CBX6O95503 412 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 CD46P15529 392 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 RGNQ15493 299 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 DCST2Q5T1A1 773 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 DESI1Q6ICB0 168 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 NUP54Q7Z3B4 507 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 MDGA2Q7Z553 956 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 ZNF227Q86WZ6 799 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 MDS2Q8NDY4 140 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 DIO2Q92813 273 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 ROPN1LQ96C74 230 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 IKZF5Q9H5V7 419 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 TIMMDC1Q9NPL8 285 aa19.57■□□□□ 0.72
CASC4-204ENST00000557945 KLHL1Q9NR64 748 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms