RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 GABRA3P34903 492 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 MAGEA5P43359 124 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 KIR3DL1P43629 444 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 HSF1Q00613 529 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 GAB1Q13480 694 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 ANXA8L1Q5VT79 327 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 C1QL3Q5VWW1 255 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 NXNQ6DKJ4 435 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 BHLHB9Q6PI77 547 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 FJX1Q86VR8 437 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 VPS37AQ8NEZ2 397 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 OR56A1Q8NGH5 318 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 SFXN5Q8TD22 340 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 ACTRT2Q8TDY3 377 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 HOXB13Q92826 284 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-209ENST00000557342 TESCQ96BS2 214 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 FAM120BQ96EK7 910 aaKnown RBP11.44□□□□□ -0.58
SLIRP-209ENST00000557342 MAELQ96JY0 434 aaKnown RBP11.44□□□□□ -0.58
SLIRP-209ENST00000557342 LDAHQ9H6V9 325 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 WDR55Q9H6Y2 383 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-209ENST00000557342 ZNF703Q9H7S9 590 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-209ENST00000557342 EQTNQ9NQ60 294 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 SIRT3Q9NTG7 399 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-209ENST00000557342 ZCCHC3Q9NUD5 404 aaKnown RBP11.44□□□□□ -0.58
SLIRP-209ENST00000557342 AIG1Q9NVV5 245 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 PCDHGB4Q9UN71 923 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 SNX8Q9Y5X2 465 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 DNAJC13O75165 2243 aa11.44□□□□□ -0.58
SLIRP-209ENST00000557342 ZNF407Q9C0G0 2248 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 TRGV5A0A0B4J1U4 118 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GOLGA8QA0A0J9YX86 632 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 A0A1B0GVC2 190 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GOLGA8OA6NCC3 632 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 WIPF3A6NGB9 483 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 LRRC3CA6NJW4 275 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GOLGA8NF8WBI6 632 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 RNASET2O00584 256 aaKnown RBP11.43□□□□□ -0.58
SLIRP-209ENST00000557342 CCL21O00585 134 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ANKRD28O15084 1053 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 HCN1O60741 890 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ICOSLGO75144 302 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 PDE9AO76083 593 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 NKX2-2O95096 273 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 TGDSO95455 350 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 IL33O95760 270 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 LDLRP01130 860 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 KRT16P08779 473 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ALOX5P09917 674 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ALDOCP09972 364 aaKnown RBP11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ESRRAP11474 423 aaPredicted RBP11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GDF1P27539 372 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 MAP3K8P41279 467 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 CCT3P49368 545 aaKnown RBP11.43□□□□□ -0.58
SLIRP-209ENST00000557342 MAN2A2P49641 1150 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 CLK3P49761 638 aaKnown RBP11.43□□□□□ -0.58
SLIRP-209ENST00000557342 C3AR1Q16581 482 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 SPDYE7PQ495Y7 208 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 BICRALQ6AI39 1079 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 TIGD3Q6B0B8 471 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 OR4F3Q6IEY1 312 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 MYO7BQ6PIF6 2116 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ANGPTL8Q6UXH0 198 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ACAD11Q709F0 780 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 TRILQ7L0X0 811 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 OR4N2Q8NGD1 307 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 OR1J4Q8NGS1 313 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 FAM57AQ8TBR7 257 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GPR151Q8TDV0 419 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 SLC9A6Q92581 669 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 EFHD2Q96C19 240 aaPredicted RBP11.43□□□□□ -0.58
SLIRP-209ENST00000557342 NTNG2Q96CW9 530 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GIMAP5Q96F15 307 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 MAGEB18Q96M61 343 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ZBTB18Q99592 522 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 EXO5Q9H790 373 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 ACKR4Q9NPB9 350 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 GIN1Q9NXP7 522 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 USH1CQ9Y6N9 552 aa11.43□□□□□ -0.58
SLIRP-209ENST00000557342 PHF3Q92576 2039 aaKnown RBP11.42□□□□□ -0.58
SLIRP-209ENST00000557342 PRSS51A0A1B0GVH4 220 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 E9PBE3 544 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 AQP7O14520 342 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 ZNF195O14628 629 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 GNB5O14775 395 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 BCKDKO14874 412 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 SNPHO15079 494 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 DIAPH2O60879 1101 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 HMGN2P05204 90 aaKnown RBP11.42□□□□□ -0.58
SLIRP-209ENST00000557342 TPOP07202 933 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 RFPL3SP0C7P2 107 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 CYP4B1P13584 511 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 IDO1P14902 403 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 S100A3P33764 101 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 PTGDSP41222 190 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 HBA1P69905 142 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 LRRC74AQ0VAA2 488 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 GSTA3Q16772 222 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 SLC9B1Q4ZJI4 515 aa11.42□□□□□ -0.58
SLIRP-209ENST00000557342 DESI1Q6ICB0 168 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms