RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 FRMD6Q96NE9 622 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 ADOQ96SZ5 270 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 SLC35A5Q9BS91 424 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 SERHL2Q9H4I8 314 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 CNOT11Q9UKZ1 510 aaKnown RBP16.07■□□□□ 0.16
SHMT2-225ENST00000556798 ZGRF1Q86YA3 2104 aa16.07■□□□□ 0.16
SHMT2-225ENST00000556798 ASPDHA6ND91 283 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 KLRC4-KLRK1H3BQV0 150 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 RFXANKO14593 260 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 TSPAN2O60636 221 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 NAGAP17050 411 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 CAPN3P20807 821 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 UBAP2LQ14157 1087 aaKnown RBP16.06■□□□□ 0.16
SHMT2-225ENST00000556798 VPS26BQ4G0F5 336 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 CDC73Q6P1J9 531 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 ZCCHC12Q6PEW1 402 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 BLOC1S3Q6QNY0 202 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 ZNF621Q6ZSS3 439 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 FBXW8Q8N3Y1 598 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 OR2M7Q8NG81 312 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 OR5D16Q8NGK9 328 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 CDS1Q92903 461 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 SPDL1Q96EA4 605 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 SLC35A4Q96G79 324 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 COL21A1Q96P44 957 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 NODALQ96S42 347 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 ACTRT3Q9BYD9 372 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 TSPAN10Q9H1Z9 355 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-225ENST00000556798 RABEP2Q9H5N1 569 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 RMND5AQ9H871 391 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 PROK2Q9HC23 129 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 SLC6A13Q9NSD5 602 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 RYDENQ9NUL5 291 aaKnown RBP16.06■□□□□ 0.16
SHMT2-225ENST00000556798 FAM53CQ9NYF3 392 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 VPS4AQ9UN37 437 aa16.06■□□□□ 0.16
SHMT2-225ENST00000556798 FAF1Q9UNN5 650 aaPredicted RBP16.06■□□□□ 0.16
SHMT2-225ENST00000556798 OR6C70A6NIJ9 312 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 TTC36A6NLP5 189 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 IGKV1D-16P01601 117 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 CNR1P21554 472 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 DRD4P21917 467 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 CHI3L1P36222 383 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-225ENST00000556798 KCNJ2P63252 427 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 PSPHP78330 225 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 IRX1P78414 480 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-225ENST00000556798 MRPS22P82650 360 aaKnown RBP16.05■□□□□ 0.16
SHMT2-225ENST00000556798 LRRC74AQ0VAA2 488 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 IGFBP7Q16270 282 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 DECR1Q16698 335 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 GTDC1Q4AE62 458 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 CYP27C1Q4G0S4 372 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 RNFT1Q5M7Z0 435 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 C6orf10Q5SRN2 563 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 CCNJQ5T5M9 372 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 METTL21CQ5VZV1 264 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 SAXO2Q658L1 398 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 BHLHB9Q6PI77 547 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 FIGNL1Q6PIW4 674 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 ANGPTL8Q6UXH0 198 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 MSANTD1Q6ZTZ1 278 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 NUP54Q7Z3B4 507 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 COX18Q8N8Q8 333 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 ITCHQ96J02 903 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 OR7D2Q96RA2 312 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 ELAC2Q9BQ52 826 aaKnown RBP16.05■□□□□ 0.16
SHMT2-225ENST00000556798 OLAHQ9NV23 265 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 TUBA8Q9NY65 449 aaPredicted RBP16.05■□□□□ 0.16
SHMT2-225ENST00000556798 FLRT3Q9NZU0 649 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 CNIH4Q9P003 139 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 KCNE3Q9Y6H6 103 aa16.05■□□□□ 0.16
SHMT2-225ENST00000556798 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 KCNH1O95259 989 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 ANP32DO95626 131 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 CYP4B1P13584 511 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 MATN1P21941 496 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 MST1P26927 711 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 MAN2A2P49641 1150 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 PNLIPRP2P54317 469 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 SPATA21Q7Z572 469 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 TRIML2Q8N7C3 387 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 ZFP62Q8NB50 900 aaPredicted RBP16.04■□□□□ 0.16
SHMT2-225ENST00000556798 PNPT1Q8TCS8 783 aaKnown RBP16.04■□□□□ 0.16
SHMT2-225ENST00000556798 ADAMTS15Q8TE58 950 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 FAR1Q8WVX9 515 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 GTF2H4Q92759 462 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 MIB2Q96AX9 1013 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 STACQ99469 402 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 FAM173AQ9BQD7 235 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 DOHHQ9BU89 302 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 NSRP1Q9H0G5 558 aaKnown RBP16.04■□□□□ 0.16
SHMT2-225ENST00000556798 OR51I1Q9H343 314 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 PIGUQ9H490 435 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 METTL7AQ9H8H3 244 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 GALNT9Q9HCQ5 603 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 SLC52A3Q9NQ40 469 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 AGPAT4Q9NRZ5 378 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 KLRF1Q9NZS2 232 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 PCNX3Q9H6A9 2034 aa16.04■□□□□ 0.16
SHMT2-225ENST00000556798 ZNF407Q9C0G0 2248 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms