RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 EGFL8Q99944 293 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 MS4A8Q9BY19 250 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 DERL2Q9GZP9 239 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 POPDC3Q9HBV1 291 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 DMRT3Q9NQL9 472 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 DNAJC11Q9NVH1 559 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 CTNNAL1Q9UBT7 734 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 FETUBQ9UGM5 382 aa8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 BOKQ9UMX3 212 aaPredicted RBP8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 FN1P02751 2386 aaKnown RBP8.17□□□□□ -1.1
GTF2A1-204ENST00000556268 CD8B2A6NJW9 211 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 PGRMC1O00264 195 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 RTCAO00442 366 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 CES2O00748 559 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 CLGNO14967 610 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 FGF17O60258 216 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 STK16O75716 305 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 GOSR1O95249 250 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 RAF1P04049 648 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 CLPSP04118 112 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 HPNP05981 417 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 SERPINB3P29508 390 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 GALNSP34059 522 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 ZNF136P52737 540 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 SESN3P58005 492 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 ID2Q02363 134 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 CRYZQ08257 329 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 ILF2Q12905 390 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 KLF10Q13118 480 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 MORF4L2Q15014 288 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 DEPDC1Q5TB30 811 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 FNDC7Q5VTL7 733 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 NSUN5P2Q63ZY6 315 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 LACC1Q8IV20 430 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 OR4N5Q8IXE1 308 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 GSPT2Q8IYD1 628 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 PDIK1LQ8N165 341 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 ZNF441Q8N8Z8 693 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 OR10G3Q8NGC4 313 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 SLC22A8Q8TCC7 542 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 TANKQ92844 425 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 PPWD1Q96BP3 646 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 LRRC46Q96FV0 321 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 FBXL20Q96IG2 436 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 C18orf12Q96KH6 178 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 CAPZA3Q96KX2 299 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 UBXN10Q96LJ8 280 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 SORCS2Q96PQ0 1159 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 TMEM79Q9BSE2 394 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 EFCAB11Q9BUY7 163 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 UBQLN3Q9H347 655 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 EXO5Q9H790 373 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 CNOT10Q9H9A5 744 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 CALHM2Q9HA72 323 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 TRMT1Q9NXH9 659 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 COPS7AQ9UBW8 275 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 MTRF1LQ9UGC7 380 aaKnown RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 PPP2R2CQ9Y2T4 447 aa8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 NSD1Q96L73 2696 aaPredicted RBP8.16□□□□□ -1.1
GTF2A1-204ENST00000556268 FREM3P0C091 2139 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 TUBAL3A6NHL2 446 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 WASHC1A8K0Z3 465 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 GPR75O95800 540 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 CD53P19397 219 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 BMP5P22003 454 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 HSPA7P48741 367 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 CDK9P50750 372 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 ARFIP1P53367 373 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 SLC37A1P57057 533 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 KCNJ2P63252 427 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 SORDQ00796 357 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 SLAMF1Q13291 335 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 SF3B4Q15427 424 aaKnown RBP eCLIP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 PPP1R7Q15435 360 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 OR4D1Q15615 310 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 HIST2H2ACQ16777 129 aaPredicted RBP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 AP5B1Q2VPB7 878 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 PAGE2BQ5JRK9 111 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 HIST2H2AA3Q6FI13 130 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 OR4C11Q6IEV9 310 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 CYS1Q717R9 158 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 GPSM1Q86YR5 675 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 PM20D2Q8IYS1 436 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 ST13P4Q8IZP2 240 aaPredicted RBP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 PDPRQ8NCN5 879 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 OR7G3Q8NG95 312 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 LINC01560Q8TB33 94 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 UBE2E3Q969T4 207 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 ESAMQ96AP7 390 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 CFAP36Q96G28 342 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 WDYHV1Q96HA8 205 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 VPS39Q96JC1 886 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 DACH2Q96NX9 599 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 OSBPL9Q96SU4 736 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 SECISBP2Q96T21 854 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 SMR3AQ99954 134 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 ANGPTL4Q9BY76 406 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 RHOJQ9H4E5 214 aa8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 RPF2Q9H7B2 306 aaKnown RBP8.15□□□□□ -1.1
GTF2A1-204ENST00000556268 COPS7BQ9H9Q2 264 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms