RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
SRP54-206ENST00000555317 GOLGA8QA0A0J9YX86 632 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 GOLGA8OA6NCC3 632 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 GOLGA8NF8WBI6 632 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 TRIM3O75382 744 aaPredicted RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 TRAPPC6AO75865 159 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 PSMG1O95456 288 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 LDLRP01130 860 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 ELAVL4P26378 380 aaKnown RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 EPHA3P29320 983 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 GABRA3P34903 492 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 GCKP35557 465 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 SOAT1P35610 550 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 CASP3P42574 277 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 FRKP42685 505 aaPredicted RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 MAN2A2P49641 1150 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 PRIM2P49643 509 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 CLK3P49761 638 aaKnown RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 DIO3P55073 304 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 C21orf58P58505 322 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 PPP2R2AP63151 447 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 OCRLQ01968 901 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 TP53BP2Q13625 1128 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 C3AR1Q16581 482 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 DPY19L1Q2PZI1 675 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 BHLHB9Q6PI77 547 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 ANGPTL8Q6UXH0 198 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 SPATA19Q7Z5L4 167 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 WDR53Q7Z5U6 358 aaPredicted RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 CD163Q86VB7 1156 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 WDR75Q8IWA0 830 aaKnown RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 OR56A1Q8NGH5 318 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 OR1J4Q8NGS1 313 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 PIWIL2Q8TC59 973 aaKnown RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 OR5P2Q8WZ92 322 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 SLC9A6Q92581 669 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 HGDQ93099 445 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 RELTQ969Z4 430 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 MOAP1Q96BY2 351 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 SLC35A4Q96G79 324 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 ZBTB18Q99592 522 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 LMF2Q9BU23 707 aaKnown RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 INTS9Q9NV88 658 aaKnown RBP11.09□□□□□ -0.63
SRP54-206ENST00000555317 QPCTLQ9NXS2 382 aa11.09□□□□□ -0.63
SRP54-206ENST00000555317 TRGV5A0A0B4J1U4 118 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 LRRC3CA6NJW4 275 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 SDHDO14521 159 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 GNB5O14775 395 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 HCN1O60741 890 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 WISP2O76076 250 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 C6orf47O95873 294 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 KRT16P08779 473 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 ALOX5P09917 674 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 KIR3DL1P43629 444 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 CCT3P49368 545 aaKnown RBP11.08□□□□□ -0.64
SRP54-206ENST00000555317 NME5P56597 212 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 PSG6Q00889 435 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 ANXA8L1Q5VT79 327 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 OGFOD2Q6N063 350 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 TMEM81Q6P7N7 255 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 ZCCHC12Q6PEW1 402 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 RPTNQ6XPR3 784 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 Q6ZPB1 254 aaPredicted RBP11.08□□□□□ -0.64
SRP54-206ENST00000555317 TRILQ7L0X0 811 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 RIMKLAQ8IXN7 391 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 COX18Q8N8Q8 333 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 OR4N2Q8NGD1 307 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 FBXO30Q8TB52 745 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 FAM57AQ8TBR7 257 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 SARAFQ96BY9 339 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 COQ8BQ96D53 544 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 FAM120BQ96EK7 910 aaKnown RBP11.08□□□□□ -0.64
SRP54-206ENST00000555317 RMND5BQ96G75 393 aaPredicted RBP11.08□□□□□ -0.64
SRP54-206ENST00000555317 TMEM41AQ96HV5 264 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 NODALQ96S42 347 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 PROK2Q9HC23 129 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 GALNT9Q9HCQ5 603 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 ACAD8Q9UKU7 415 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 FAF1Q9UNN5 650 aaPredicted RBP11.08□□□□□ -0.64
SRP54-206ENST00000555317 ZNF835Q9Y2P0 537 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 C15orf41Q9Y2V0 281 aa11.08□□□□□ -0.64
SRP54-206ENST00000555317 NCKAP5O14513 1909 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 OR14I1A6ND48 311 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 FIGNL2A6NMB9 653 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 NPIPA2E9PIF3 369 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 NPIPA3F8WFD2 350 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 AQP7O14520 342 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 BCKDKO14874 412 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 ZNHIT1O43257 154 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 SUSD5O60279 629 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 TSPAN2O60636 221 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 ZG16O60844 167 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 DIAPH2O60879 1101 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 ICOSLGO75144 302 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 IGHG3P01860 377 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 CELA3AP09093 270 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 RFPL3SP0C7P2 107 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 IDO1P14902 403 aa11.07□□□□□ -0.64
SRP54-206ENST00000555317 EVI2BP34910 448 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms