RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 ENDOUP21128 410 aaKnown RBP13.92□□□□□ -0.18
XRCC3-211ENST00000555055 CHMP24386 653 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 NTSP30990 170 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 LSSP48449 732 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 SRP54P61011 504 aaKnown RBP13.92□□□□□ -0.18
XRCC3-211ENST00000555055 NXNL2Q5VZ03 156 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 MTSS1LQ765P7 747 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 ATCAYQ86WG3 371 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 FAM131CQ96AQ9 280 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 CHCHD6Q9BRQ6 235 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 TAPBPLQ9BX59 468 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 RNF167Q9H6Y7 350 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 KIR3DX1Q9H7L2 352 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 NT5DC2Q9H857 520 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 ZNF556Q9HAH1 456 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 SMURF1Q9HCE7 757 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 ENOPH1Q9UHY7 261 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 HCN4Q9Y3Q4 1203 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 CCRL2O00421 344 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 SEC14L5O43304 696 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 RHCEP18577 417 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 HNRNPA2B1P22626 353 aaKnown RBP13.92□□□□□ -0.18
XRCC3-211ENST00000555055 CNR2P34972 360 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 LIMS1P48059 325 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 RFX2P48378 723 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 DEFB110Q30KQ9 67 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 FAM111BQ6SJ93 734 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 SLC44A3Q8N4M1 653 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 OR5T3Q8NGG3 340 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 OR6T1Q8NGN1 323 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 SLC7A13Q8TCU3 470 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 FAIM2Q9BWQ8 316 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 IMPAD1Q9NX62 359 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 DUSP12Q9UNI6 340 aa13.92□□□□□ -0.18
XRCC3-211ENST00000555055 GPR55Q9Y2T6 319 aaPredicted RBP13.92□□□□□ -0.18
XRCC3-211ENST00000555055 SHISA7A6NL88 538 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 H3BN98 237 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 SSX4O60224 188 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 FCMRO60667 390 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 HSMCR30P0CW71 290 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 TYRP1P17643 537 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 ELAVL4P26378 380 aaKnown RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 TEAD1P28347 426 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 TNFSF8P32971 234 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 ASAH1Q13510 395 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 SMRP1Q8NCR6 262 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 TPSD1Q9BZJ3 242 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 CAPN10Q9HC96 672 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 DIABLOQ9NR28 239 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 MS4A12Q9NXJ0 267 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 P2RX2Q9UBL9 471 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 ENTPD4Q9Y227 616 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 MEIOCA2RUB1 952 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 PROM1O43490 865 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 MPZL2O60487 215 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 LDB3O75112 727 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 PIPP12273 146 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 F3P13726 295 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 UGT2B7P16662 529 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 CBLP22681 906 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 MLLT3P42568 568 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 KCNJ5P48544 419 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 GALK2Q01415 458 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 ST3GAL4Q11206 333 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 ELOAQ14241 798 aaKnown RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 MRM1Q6IN84 353 aaKnown RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 SLC48A1Q6P1K1 146 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 NOXA1Q86UR1 476 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 PAQR7Q86WK9 346 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 VRK2Q86Y07 508 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 TRIM48Q8IWZ4 208 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 MFSD9Q8NBP5 474 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 SLC7A6Q92536 515 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 SCARF2Q96GP6 870 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 MSLNLQ96KJ4 702 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 RAB11FIP5Q9BXF6 653 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 ACSS1Q9NUB1 689 aaPredicted RBP13.91□□□□□ -0.18
XRCC3-211ENST00000555055 CES1P1Q9UKY3 287 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 V9GYH0 126 aa13.91□□□□□ -0.18
XRCC3-211ENST00000555055 TRIM3O75382 744 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-211ENST00000555055 TNNI3P19429 210 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 TARDBPQ13148 414 aaKnown RBP eCLIP13.9□□□□□ -0.18
XRCC3-211ENST00000555055 TBRG1Q3YBR2 411 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 ARMC4Q5T2S8 1044 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 CCNJQ5T5M9 372 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 ZNF770Q6IQ21 691 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-211ENST00000555055 XKRXQ6PP77 449 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 GATAD2AQ86YP4 633 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 FLVCR1-AS1Q8TAF5 88 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 GPA33Q99795 319 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 RBCK1Q9BYM8 510 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 ACOXLQ9NUZ1 547 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 DRD2P14416 443 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 MLLT1Q03111 559 aaPredicted RBP13.9□□□□□ -0.18
XRCC3-211ENST00000555055 CCDC58Q4VC31 144 aa13.9□□□□□ -0.18
XRCC3-211ENST00000555055 TMEM35AQ53FP2 167 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms