RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 LARP4Q71RC2 724 aaKnown RBP eCLIP7.37□□□□□ -1.23
ACTN1-212ENST00000554158 ISCA2Q86U28 154 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 STK32CQ86UX6 486 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 TREML1Q86YW5 311 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 PPM1NQ8N819 430 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 OR52R1Q8NGF1 315 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 HGDQ93099 445 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 TMBIM1Q969X1 311 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 GTPBP3Q969Y2 492 aaKnown RBP7.37□□□□□ -1.23
ACTN1-212ENST00000554158 STARD4Q96DR4 205 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 UBXN10Q96LJ8 280 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 ADOQ96SZ5 270 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 TACO1Q9BSH4 297 aaKnown RBP7.37□□□□□ -1.23
ACTN1-212ENST00000554158 PINK1Q9BXM7 581 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 ELOVL6Q9H5J4 265 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 PSD3Q9NYI0 1048 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 NFU1Q9UMS0 254 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 PLLPQ9Y342 182 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 MRPS18CQ9Y3D5 142 aaKnown RBP7.37□□□□□ -1.23
ACTN1-212ENST00000554158 ATRQ13535 2644 aa7.37□□□□□ -1.23
ACTN1-212ENST00000554158 HEATR1Q9H583 2144 aaKnown RBP7.37□□□□□ -1.23
ACTN1-212ENST00000554158 CCDC189A1A4V9 331 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 FRG2CA6NGY1 282 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 E7ESA3 106 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 H3BML4 177 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 CCDC188H7C350 402 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 LINC01387J3KSC0 135 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 EIF3HO15372 352 aaKnown RBP eCLIP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 EMC8O43402 210 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 HCRTR2O43614 444 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 WISP3O95389 354 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 ATP1B1P05026 303 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 GSTA2P09210 222 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 HK1P19367 917 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 IVDP26440 423 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 STX2P32856 288 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 IDUAP35475 653 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 GFRA1P56159 465 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 DSCR4P56555 118 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 CLDN18P56856 261 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 RPS4XP62701 263 aaKnown RBP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 OCRLQ01968 901 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 MAP4K2Q12851 820 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 GANABQ14697 944 aaKnown RBP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 ZKSCAN8Q15776 578 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 CLEC12BQ2HXU8 276 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 SGO1Q5FBB7 561 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 FRG2Q64ET8 278 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 ANKRD34AQ69YU3 496 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 HEPHL1Q6MZM0 1159 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 FAM111BQ6SJ93 734 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 ZNF704Q6ZNC4 412 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 GOLGA7Q7Z5G4 137 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 CMC1Q7Z7K0 106 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 ADGRE4PQ86SQ3 457 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 WFDC8Q8IUA0 241 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 SAMD14Q8IZD0 417 aaPredicted RBP7.36□□□□□ -1.23
ACTN1-212ENST00000554158 WDSUB1Q8N9V3 476 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 RHEBL1Q8TAI7 183 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 NXNL1Q96CM4 212 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 FRG2BQ96QU4 278 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 ATOH8Q96SQ7 321 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 LRRC1Q9BTT6 524 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 NGBQ9NPG2 151 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 YAE1D1Q9NRH1 226 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 FBXL2Q9UKC9 423 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 SLC12A4Q9UP95 1085 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 DTX4Q9Y2E6 619 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 SNX24Q9Y343 169 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 RNF11Q9Y3C5 154 aa7.36□□□□□ -1.23
ACTN1-212ENST00000554158 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-212ENST00000554158 A0A1W2PS29 197 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 TCRBV9S1A1TA0A576 114 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 CXorf49A8MYA2 514 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-212ENST00000554158 EIF1AYO14602 144 aaKnown RBP7.35□□□□□ -1.23
ACTN1-212ENST00000554158 HS3ST1O14792 307 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 TLX2O43763 284 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-212ENST00000554158 SCO2O43819 266 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 DLX3O60479 287 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 TNFRSF21O75509 655 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 C8BP07358 591 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 CD8BP10966 210 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 NID1P14543 1247 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 GMPRP36959 345 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 GPX6P59796 221 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 STX5Q13190 355 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 TNK1Q13470 666 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 NAB1Q13506 487 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 ACAP2Q15057 778 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 PON3Q15166 354 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 PRICKLE4Q2TBC4 344 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 CHRFAM7AQ494W8 412 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 SH2D4BQ5SQS7 431 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 SLC48A1Q6P1K1 146 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 METTL2BQ6P1Q9 378 aaKnown RBP7.35□□□□□ -1.23
ACTN1-212ENST00000554158 ZNF474Q6S9Z5 364 aaPredicted RBP7.35□□□□□ -1.23
ACTN1-212ENST00000554158 MILR1Q7Z6M3 343 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 CCDC25Q86WR0 208 aa7.35□□□□□ -1.23
ACTN1-212ENST00000554158 GAS2L3Q86XJ1 694 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms