RNA–Protein interactions for RNA: ENST00000554064.5

FCF1-205, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-205ENST00000554064 FOLH1Q04609 750 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 UBE2SQ16763 222 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 USH1GQ495M9 461 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 HSP90AA4PQ58FG1 418 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 KHDRBS2Q5VWX1 349 aaKnown RBP2.52□□□□□ -2.01
FCF1-205ENST00000554064 ALKBH5Q6P6C2 394 aaKnown RBP2.52□□□□□ -2.01
FCF1-205ENST00000554064 C16orf54Q6UWD8 224 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 ABRAXAS1Q6UWZ7 409 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 ANKRD46Q86W74 232 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 CACUL1Q86Y37 369 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 VSTM4Q8IW00 320 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 CCDC65Q8IXS2 484 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 CSGALNACT2Q8N6G5 542 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 ZNF397Q8NF99 534 aaPredicted RBP2.52□□□□□ -2.01
FCF1-205ENST00000554064 ACER1Q8TDN7 264 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 CCDC51Q96ER9 411 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 SIPA1Q96FS4 1042 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 ZBED3Q96IU2 234 aaPredicted RBP2.52□□□□□ -2.01
FCF1-205ENST00000554064 CNDP2Q96KP4 475 aaKnown RBP2.52□□□□□ -2.01
FCF1-205ENST00000554064 PANX2Q96RD6 677 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 PAXXQ9BUH6 204 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 NUP58Q9BVL2 599 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 TRIM9Q9C026 710 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 HSD3B7Q9H2F3 369 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 THAP9Q9H5L6 903 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 ZNF665Q9H7R5 613 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 VCPKMTQ9H867 229 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 AMBNQ9NP70 447 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 ANAPC5Q9UJX4 755 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 PYCARDQ9ULZ3 195 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 RNF24Q9Y225 148 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 NTNG1Q9Y2I2 539 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 MYH1P12882 1939 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 FOCADQ5VW36 1801 aa2.52□□□□□ -2.01
FCF1-205ENST00000554064 CNTNAP1P78357 1384 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 PFASO15067 1338 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 SYNRGQ9UMZ2 1314 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ARHGEF37A1IGU5 675 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ILVBLA1L0T0 632 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 HTR3EA5X5Y0 456 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 C5orf52A6NGY3 159 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 E9PMD0 336 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 SAP18O00422 153 aaKnown RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 PES1O00541 588 aaKnown RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 DYNC1I1O14576 645 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 WDR46O15213 610 aaKnown RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 MSH4O15457 936 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 SLC37A4O43826 429 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 KLRC4O43908 158 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 GNA14O95837 355 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 FCGR3AP08637 254 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 FOSL2P15408 326 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ELK1P19419 428 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 MUTP22033 750 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 RPA1P27694 616 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 PPP2R1BP30154 601 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 TIA1P31483 386 aaKnown RBP eCLIP2.51□□□□□ -2.01
FCF1-205ENST00000554064 MTIF2P46199 727 aaKnown RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 CAPZA1P52907 286 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 SLC25A1P53007 311 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 FKBP1BP68106 108 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 CCZ1BP86790 482 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 CCZ1P86791 482 aaPredicted RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 LRRC63Q05C16 580 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 SPP2Q13103 211 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 GIT2Q14161 759 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 SLC17A1Q14916 467 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 KRT31Q15323 416 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 SHROOM1Q2M3G4 852 aaPredicted RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 C14orf28Q4W4Y0 310 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 PM20D1Q6GTS8 502 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 CENPPQ6IPU0 288 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 NIPA1Q7RTP0 329 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 MTERF4Q7Z6M4 381 aaKnown RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 MYOCDQ8IZQ8 938 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ZNF491Q8N8L2 437 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 KIAA0895Q8NCT3 520 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 OR8K1Q8NGG5 319 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 CRYGNQ8WXF5 182 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 DCPSQ96C86 337 aaKnown RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 C16orf45Q96MC5 204 aaPredicted RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 MBOAT7Q96N66 472 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ZNF285Q96NJ3 590 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 RIT2Q99578 217 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 TSG101Q99816 390 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 TUBGCP2Q9BSJ2 902 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 DEFB129Q9H1M3 183 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 MINDY3Q9H8M7 445 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 TUFT1Q9NNX1 390 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 KCNMB3Q9NPA1 279 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ABCC13Q9NSE7 274 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ZNHIT6Q9NWK9 470 aaKnown RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 HOXC10Q9NYD6 342 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 RCOR3Q9P2K3 495 aaPredicted RBP2.51□□□□□ -2.01
FCF1-205ENST00000554064 CDK5RAP2Q96SN8 1893 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 ECM29Q5VYK3 1845 aa2.51□□□□□ -2.01
FCF1-205ENST00000554064 IGLV3-22A0A075B6J6 115 aa2.5□□□□□ -2.01
FCF1-205ENST00000554064 UQCRHLA0A096LP55 91 aa2.5□□□□□ -2.01
FCF1-205ENST00000554064 CALUO43852 315 aaPredicted RBP2.5□□□□□ -2.01
FCF1-205ENST00000554064 SELENOFO60613 162 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms