RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ZNF285Q96NJ3 590 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 SDF2Q99470 211 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 IER2Q9BTL4 223 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 POLR1BQ9H9Y6 1135 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 MAN2C1Q9NTJ4 1040 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 KCNE5Q9UJ90 142 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 HCN4Q9Y3Q4 1203 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 CEPT1Q9Y6K0 416 aa11.88□□□□□ -0.51
VIPAS39-206ENST00000553888 CPED1A4D0V7 1026 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 CPSF4LA6NMK7 179 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 ASNA1O43681 348 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 BCAS1O75363 584 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 H1F0P07305 194 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 GLB1P16278 677 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 CD53P19397 219 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 TRHRP34981 398 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 STX4Q12846 297 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 GUSBP11Q6P575 273 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 ENTHD1Q8IYW4 607 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 SLC7A5P1Q8MH63 180 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 OR51Q1Q8NH59 317 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 OR1L3Q8NH93 324 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 GPR151Q8TDV0 419 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 APH1BQ8WW43 257 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 HDAC2Q92769 488 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 GABARAPL3Q9BY60 117 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 ALOXE3Q9BYJ1 711 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 LIN28AQ9H9Z2 209 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 ZMAT5Q9UDW3 170 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PILRBQ9UKJ0 227 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 WDR45Q9Y484 360 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 H3BMH7 237 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 OR10H3O60404 316 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 MAN1A2O60476 641 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PLOD3O60568 738 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 OR2B3O76000 313 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 ANGPTL1O95841 491 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 CFIP05156 583 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 POU1F1P28069 291 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 GABRA3P34903 492 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 RYKP34925 604 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 IDH2P48735 452 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PGDP52209 483 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 MAPK10P53779 464 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 TUBA4AP68366 448 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 HPCAP84074 193 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 KEAP1Q14145 624 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 LPAL2Q16609 132 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PLK5Q496M5 336 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PERM1Q5SV97 790 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PODNL1Q6PEZ8 512 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PRR23CQ6ZRP0 262 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 VWA5B2Q8N398 1253 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 CTHRC1Q96CG8 243 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 BTBD2Q9BX70 525 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 AMBNQ9NP70 447 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PRTFDC1Q9NRG1 225 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 RNF6Q9Y252 685 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 LAMTOR5O43504 91 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 WBP4O75554 376 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 S1PR1P21453 382 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 ARRB1P49407 418 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 EPHA4P54764 986 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 ZNF155Q12901 538 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 MAD2L1BPQ15013 274 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 NDUFA9Q16795 377 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 HLA-BQ31612 363 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 DCST2Q5T1A1 773 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 RCBTB1Q8NDN9 531 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 FAM81AQ8TBF8 368 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 FBLIM1Q8WUP2 373 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 RASSF5Q8WWW0 418 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 PINK1Q9BXM7 581 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 CXorf21Q9HAI6 301 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 FANCEQ9HB96 536 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 NECTIN3Q9NQS3 549 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 EPHA6Q9UF33 1036 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 LIPT1Q9Y234 373 aa11.87□□□□□ -0.51
VIPAS39-206ENST00000553888 SMIM31A0A1B0GVY4 71 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 E9PQ18 207 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 DUX1O43812 170 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 UGT2B17O75795 530 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 SLC35E2P0CK97 266 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 ANXA8P13928 327 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 CDH2P19022 906 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 EPHA8P29322 1005 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 KRT20P35900 424 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 ARL4DP49703 201 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 EFNA3P52797 238 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 GNA13Q14344 377 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 ZNF267Q14586 743 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 ARHGAP11BQ3KRB8 267 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 DCST1Q5T197 706 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 C1orf189Q5VU69 101 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 ZNF836Q6ZNA1 936 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 PRSS58Q8IYP2 241 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 COX18Q8N8Q8 333 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
VIPAS39-206ENST00000553888 GIMAP1Q8WWP7 306 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms