RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 NMUR2Q9GZQ4 415 aa2.19□□□□□ -2.06
VRK1-202ENST00000553683 PLSCR3Q9NRY6 295 aa2.19□□□□□ -2.06
VRK1-202ENST00000553683 ELOVL2Q9NXB9 296 aa2.19□□□□□ -2.06
VRK1-202ENST00000553683 LRRK1Q38SD2 2015 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 FBLL1A6NHQ2 334 aaKnown RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 TMEM110-MUSTN1A8MSY1 372 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 OR7A17O14581 309 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 LRP3O75074 770 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 GOSR1O95249 250 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 PNPP00491 289 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 CPN1P15169 458 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 RPS2P15880 293 aaKnown RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 IDSP22304 550 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 MARCKSP29966 332 aaPredicted RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 IL2RGP31785 369 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 UGT1A3P35503 534 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 EMDP50402 254 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 RPL32P62910 135 aaKnown RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 HERVK_113P63132 956 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 ERVK-8P63133 956 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 NOP14P78316 857 aaKnown RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 PPP1R8Q12972 351 aaKnown RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 IL18R1Q13478 541 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 KYAT1Q16773 422 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 CYP51A1Q16850 503 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 PARP6Q2NL67 630 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 ZNF699Q32M78 642 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 C2orf76Q3KRA6 126 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 CCDC184Q52MB2 194 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 EOGTQ5NDL2 527 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 CELF3Q5SZQ8 465 aaKnown RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 TMEM110Q86TL2 294 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 GPBP1Q86WP2 473 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 OTUD6BQ8N6M0 293 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 ATP6V1E2Q96A05 226 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 C18orf25Q96B23 403 aaPredicted RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 DESI2Q9BSY9 194 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 ERVK-6Q9BXR3 956 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 TEX13AQ9BXU3 409 aaPredicted RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 NLNQ9BYT8 704 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 MYOZ2Q9NPC6 264 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 GALPQ9UBC7 116 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 CECR2Q9BXF3 1484 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 GTF3C1Q12789 2109 aa2.18□□□□□ -2.06
VRK1-202ENST00000553683 COL4A4P53420 1690 aaPredicted RBP2.18□□□□□ -2.06
VRK1-202ENST00000553683 RPGRIP1LQ68CZ1 1315 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 MACROD2A1Z1Q3 448 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 FAM231BA6NCW3 169 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 TM9SF1O15321 606 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 EMC8O43402 210 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 CABYRO75952 493 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 CXCL14O95715 111 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 SEMG1P04279 462 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 PROS1P07225 676 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 SLC35G4P0C7Q5 338 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 CD1EP15812 388 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 NF2P35240 595 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 ACVR1BP36896 505 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 PITPNBP48739 271 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 POU3F4P49335 361 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 ZNF133P52736 654 aaPredicted RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 DIO3P55073 304 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 GNB2P62879 340 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 CKAP4Q07065 602 aaKnown RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 ORC2Q13416 577 aaPredicted RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 RAB35Q15286 201 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 DCAF4L1Q3SXM0 396 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 PRAMEF7Q5VXH5 474 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 TOM1L2Q6ZVM7 507 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 PAQR9Q6ZVX9 377 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 PRSS48Q7RTY5 328 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 CCDC91Q7Z6B0 441 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 AMZ2Q86W34 360 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 CCDC170Q8IYT3 715 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 LEMD2Q8NC56 503 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 ZNF397Q8NF99 534 aaPredicted RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 TRIM44Q96DX7 344 aaPredicted RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 DEFB118Q96PH6 123 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 HES7Q9BYE0 225 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 GLT8D2Q9H1C3 349 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 Q9H3A6 140 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 ISG20L2Q9H9L3 353 aaKnown RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 DCAF13Q9NV06 445 aaKnown RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 CYP39A1Q9NYL5 469 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 SLC2A6Q9UGQ3 507 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 FAM153AQ9UHL3 310 aa2.17□□□□□ -2.06
VRK1-202ENST00000553683 ZNF490Q9ULM2 529 aaPredicted RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 DHX29Q7Z478 1369 aaKnown RBP2.17□□□□□ -2.06
VRK1-202ENST00000553683 TLR4O00206 839 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 LATO43561 262 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 LYPLA1O75608 230 aaPredicted RBP2.16□□□□□ -2.06
VRK1-202ENST00000553683 STSP08842 583 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 COPB2P35606 906 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 NLRP11P59045 1033 aaKnown RBP2.16□□□□□ -2.06
VRK1-202ENST00000553683 RPS6P62753 249 aaKnown RBP2.16□□□□□ -2.06
VRK1-202ENST00000553683 PSG7Q13046 419 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 IL17AQ16552 155 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 LRIT3Q3SXY7 679 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 OR2B11Q5JQS5 317 aa2.16□□□□□ -2.06
VRK1-202ENST00000553683 SPATA46Q5T0L3 261 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms