RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SNAPC1Q16533 368 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 FAM214AQ32MH5 1076 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 EIPR1Q53HC9 387 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 C18orf63Q68DL7 685 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3CQ6IPX1 549 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 CDC73Q6P1J9 531 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 ASPGQ86U10 573 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 PHC2Q8IXK0 858 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TBC1D3Q8IZP1 549 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-205ENST00000553474 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 POC5Q8NA72 575 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 OR52I1Q8NGK6 324 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 PIGXQ8TBF5 258 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 ADAMTS15Q8TE58 950 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 ACOT11Q8WXI4 607 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-205ENST00000553474 DIO2Q92813 273 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 KLK6Q92876 244 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TMCO6Q96DC7 493 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TM4SF19Q96DZ7 209 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 NECAB3Q96P71 396 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-205ENST00000553474 COQ7Q99807 217 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 MED18Q9BUE0 208 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 SYNDIG1Q9H7V2 258 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 FGF22Q9HCT0 170 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 SPHK1Q9NYA1 384 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF232Q9UNY5 417 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 NCKAP1Q9Y2A7 1128 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 ANTXRLA6NF34 631 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 UBXN7O94888 489 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 SOX30O94993 753 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 APBB3O95704 486 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 CCNYL3P0C7X3 344 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 SMIM10L1P0DMW3 83 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 GAAP10253 952 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 FPR3P25089 353 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TDGQ13569 410 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 NFATC4Q14934 902 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 GIMAP5Q96F15 307 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 SMIM10Q96HG1 83 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 TXNDC15Q96J42 360 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 SRMSQ9H3Y6 488 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 EXOSC4Q9NPD3 245 aaKnown RBP12.1□□□□□ -0.47
SHMT2-205ENST00000553474 NLGN3Q9NZ94 848 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 PLEKHM1Q9Y4G2 1056 aa12.1□□□□□ -0.47
SHMT2-205ENST00000553474 ATG2BQ96BY7 2078 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 FAM170BA6NMN3 283 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 KDM4EB2RXH2 506 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-205ENST00000553474 AQP9O43315 295 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 ADAM23O75077 832 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 PRKRAO75569 313 aaKnown RBP12.09□□□□□ -0.47
SHMT2-205ENST00000553474 THBS1P07996 1170 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 IGFBP1P08833 259 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-205ENST00000553474 RAB8AP61006 207 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 BTN3A2P78410 334 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 TPBGQ13641 420 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 LARS2Q15031 903 aaKnown RBP12.09□□□□□ -0.47
SHMT2-205ENST00000553474 ARHGAP11BQ3KRB8 267 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 SOWAHCQ53LP3 525 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-205ENST00000553474 TMEM196Q5HYL7 178 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 MANEAQ5SRI9 462 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 ACSM5Q6NUN0 579 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 MFSD12Q6NUT3 480 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 ZNF730Q6ZMV8 503 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 LAPTM4BQ86VI4 370 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 SNX29P2Q8IUI4 249 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 PEX5LQ8IYB4 626 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 OR2L13Q8N349 312 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 OR4K14Q8NGD5 310 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 OR9A2Q8NGT5 310 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 RSC1A1Q92681 617 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 ERLEC1Q96DZ1 483 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 C16orf58Q96GQ5 468 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 C10orf90Q96M02 699 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 WDR92Q96MX6 357 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 RNF167Q9H6Y7 350 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 SMURF1Q9HCE7 757 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 IL20Q9NYY1 176 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 CLEC2DQ9UHP7 191 aa12.09□□□□□ -0.47
SHMT2-205ENST00000553474 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 ALOX12P18054 663 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 SOX3P41225 446 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 OMPP47874 163 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 MTNR1AP48039 350 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 RGS8P57771 180 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-205ENST00000553474 CHRNEQ04844 493 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 DUSP2Q05923 314 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 FOXD4Q12950 439 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-205ENST00000553474 DUSP8Q13202 625 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 PLK5Q496M5 336 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 ZCCHC12Q6PEW1 402 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 USP53Q70EK8 1073 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 CAMKVQ8NCB2 501 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 OR4E2Q8NGC2 313 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 OR52P1PQ8NH57 321 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 SLC25A46Q96AG3 418 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 YIPF4Q9BSR8 244 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms