RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 Q96MT0 163 aa13.09□□□□□ -0.31
RAB3IP-216ENST00000552199 ANKRD19PQ9H560 264 aa13.09□□□□□ -0.31
RAB3IP-216ENST00000552199 ANKHQ9HCJ1 492 aa13.09□□□□□ -0.31
RAB3IP-216ENST00000552199 ADAP2Q9NPF8 381 aa13.09□□□□□ -0.31
RAB3IP-216ENST00000552199 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
RAB3IP-216ENST00000552199 MAT2BQ9NZL9 334 aa13.09□□□□□ -0.31
RAB3IP-216ENST00000552199 RDH16O75452 317 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 ALOX5P09917 674 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 PIPP12273 146 aaPredicted RBP13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 NME1P15531 152 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 GSTM3P21266 225 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 IFNA8P32881 189 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 TRHRP34981 398 aaPredicted RBP13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 AVPR1BP47901 424 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 FASLGP48023 281 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 MLLT10P55197 1068 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 RGS8P57771 180 aaPredicted RBP13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 VBP1P61758 197 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 ST3GAL3Q11203 375 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF829Q3KNS6 432 aaPredicted RBP13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 LRIT3Q3SXY7 679 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 ZCCHC12Q6PEW1 402 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 KLHL35Q6PF15 583 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 GKN2Q86XP6 184 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 AVL9Q8NBF6 648 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 OR8J1Q8NGP2 316 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 OR9A4Q8NGU2 314 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 LMX1AQ8TE12 382 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 CDCA4Q9BXL8 241 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 UCK1Q9HA47 277 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 CACYBPQ9HB71 228 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 CLCA2Q9UQC9 943 aa13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 MRPS17Q9Y2R5 130 aaKnown RBP13.08□□□□□ -0.32
RAB3IP-216ENST00000552199 M0R3G1 203 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 AP3D1O14617 1153 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CHST10O43529 356 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 PTHP01270 115 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 ADORA3P0DMS8 318 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 ALDH4A1P30038 563 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 IFNGR2P38484 337 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CDK5Q00535 292 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 OCA2Q04671 838 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 DUSP8Q13202 625 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 LARS2Q15031 903 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 SYT16Q17RD7 645 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 PRTGQ2VWP7 1150 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 PLAG1Q6DJT9 500 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF836Q6ZNA1 936 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 PRICKLE2Q7Z3G6 844 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 ZBTB46Q86UZ6 589 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 IQCF1Q8N6M8 205 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CDRT4Q8N9R6 151 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 STACQ99469 402 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 MCHR1Q99705 422 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 DUSP22Q9NRW4 184 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 SATB2Q9UPW6 733 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 KNL1Q8NG31 2342 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 AGAP5A6NIR3 686 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 FAM170BA6NMN3 283 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 SRPX2O60687 465 aaPredicted RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CNOT3O75175 753 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 PROS1P07225 676 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 THBS1P07996 1170 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 ADRA2AP08913 450 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CT62P0C5K7 136 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 MAOBP27338 520 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CALRP27797 417 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 MAP3K8P41279 467 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 GIPRP48546 466 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 BMXP51813 675 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 NCS1P62166 190 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 EEF1A1P68104 462 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 HOXC5Q00444 222 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 GINS1Q14691 196 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 EXOSC7Q15024 291 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 GPR68Q15743 365 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 OCLNQ16625 522 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CCNJQ5T5M9 372 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 SLC46A3Q7Z3Q1 461 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 TCEANCQ8N8B7 351 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CADM4Q8NFZ8 388 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 DYNC2LI1Q8TCX1 351 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 RPL3LQ92901 407 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 BORCS5Q969J3 196 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 CTHRC1Q96CG8 243 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 LGALS12Q96DT0 336 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 SAP130Q9H0E3 1048 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 PCED1AQ9H1Q7 454 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 TVP23BQ9NYZ1 205 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 DNAJC27Q9NZQ0 273 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 DOLKQ9UPQ8 538 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 NTNG1Q9Y2I2 539 aa13.07□□□□□ -0.32
RAB3IP-216ENST00000552199 LILRA5A6NI73 299 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 STX11O75558 287 aa13.06□□□□□ -0.32
RAB3IP-216ENST00000552199 OR5F1O95221 314 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms