RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF223Q9UK11 482 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 KCND3Q9UK17 655 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 FBXL4Q9UKA2 621 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 SNX7Q9UNH6 387 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 PTRH2Q9Y3E5 179 aaKnown RBP4.53□□□□□ -1.68
SCAF11-214ENST00000550893 MAD1L1Q9Y6D9 718 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 NOTCH2Q04721 2471 aa4.53□□□□□ -1.68
SCAF11-214ENST00000550893 MYO9AB2RTY4 2548 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 MYO7BQ6PIF6 2116 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 KCNE1BA0A087WTH5 132 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 IGHV1-45A0A0A0MS14 117 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 A0A0A6YYC8 382 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 IGHV3-20A0A0C4DH32 117 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 HYKKA2RU49 373 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF860A6NHJ4 632 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 EFCAB8A8MWE9 144 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 CCDC188H7C350 402 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 I3L1I5 382 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ZSCAN12O43309 604 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ASNA1O43681 348 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF354AO60765 605 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 RDH16O75452 317 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 BMP10O95393 424 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 TTC4O95801 387 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 GAS8O95995 478 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 EZRP15311 586 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 CD1DP15813 335 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 IL1RNP18510 177 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 HNRNPH1P31943 449 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 OTX2P32243 289 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 GRK5P34947 590 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 CDKN2AP42771 156 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 DCDP81605 110 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 PDIA2Q13087 525 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 NAE1Q13564 534 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 TMED2Q15363 201 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 PPP1R7Q15435 360 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 TSNQ15631 228 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ADPRMQ3LIE5 342 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 KBTBD12Q3ZCT8 623 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 KLHL22Q53GT1 634 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 HMBOX1Q6NT76 420 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 JMJD6Q6NYC1 403 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 CASC4Q6P4E1 433 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 TMEM88Q6PEY1 159 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 LCTLQ6UWM7 567 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 Q6ZS92 163 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ASB18Q6ZVZ8 466 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 RNF175Q8N4F7 328 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 OTUD6BQ8N6M0 293 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 CSNK1A1LQ8N752 337 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 OR9A4Q8NGU2 314 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 GSDMBQ8TAX9 411 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 GRK7Q8WTQ7 553 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 THAP4Q8WY91 577 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ZUFSPQ96AP4 578 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ESAMQ96AP7 390 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 KIAA1143Q96AT1 154 aaPredicted RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 RHBDF1Q96CC6 855 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 LRRC39Q96DD0 335 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 PRAP1Q96NZ9 151 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 RBBP8Q99708 897 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 RAB11FIP5Q9BXF6 653 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 VN1R1Q9GZP7 353 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 HIPK2Q9H2X6 1198 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 RHOJQ9H4E5 214 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 KLHL31Q9H511 634 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 MRPS30Q9NP92 439 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 NINJ2Q9NZG7 142 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 NFU1Q9UMS0 254 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 AP1M2Q9Y6Q5 423 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 CACNA1DQ01668 2161 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 ANK3Q12955 4377 aaKnown RBP4.52□□□□□ -1.69
SCAF11-214ENST00000550893 PKDREJQ9NTG1 2253 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 HIVEP1P15822 2718 aa4.52□□□□□ -1.69
SCAF11-214ENST00000550893 MAGEB16A2A368 324 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CTAGE9A4FU28 777 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CXorf65A6NEN9 183 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 FOXO6A8MYZ6 492 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 IDSB3KWA1 339 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 TCP11X1B4DZS4 312 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 AP3B1O00203 1094 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 SLC16A5O15375 505 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 KLK8O60259 260 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 PRKNO60260 465 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 VPS26AO75436 327 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 NSA2O95478 260 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CATP04040 527 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 RPN2P04844 631 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 C8GP07360 202 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 PPP2R1BP30154 601 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 GGT5P36269 586 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 PPM1FP49593 454 aaPredicted RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 CCL11P51671 97 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 GPR143P51810 404 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 OLR1P78380 273 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 MC1RQ01726 317 aa4.51□□□□□ -1.69
SCAF11-214ENST00000550893 EEF1A2Q05639 463 aaKnown RBP4.51□□□□□ -1.69
SCAF11-214ENST00000550893 BTKQ06187 659 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms