RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TXNL4AP83876 142 aaKnown RBP16.12■□□□□ 0.17
HDAC7-227ENST00000548080 ZNF630Q2M218 657 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-227ENST00000548080 PRICKLE4Q2TBC4 344 aa16.12■□□□□ 0.17
HDAC7-227ENST00000548080 TNFAIP8L2Q6P589 184 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-227ENST00000548080 FAM111BQ6SJ93 734 aa16.12■□□□□ 0.17
HDAC7-227ENST00000548080 LINC00696Q6ZRV3 163 aa16.12■□□□□ 0.17
HDAC7-227ENST00000548080 ST13P4Q8IZP2 240 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-227ENST00000548080 MAL2Q969L2 176 aa16.12■□□□□ 0.17
HDAC7-227ENST00000548080 MFRPQ9BY79 579 aa16.12■□□□□ 0.17
HDAC7-227ENST00000548080 SERHL2Q9H4I8 314 aa16.12■□□□□ 0.17
HDAC7-227ENST00000548080 DDX18Q9NVP1 670 aaKnown RBP16.12■□□□□ 0.17
HDAC7-227ENST00000548080 THUMPD1Q9NXG2 353 aaKnown RBP16.12■□□□□ 0.17
HDAC7-227ENST00000548080 C19orf53Q9UNZ5 99 aaPredicted RBP16.12■□□□□ 0.17
HDAC7-227ENST00000548080 AP4S1Q9Y587 144 aa16.12■□□□□ 0.17
HDAC7-227ENST00000548080 A0A087WV62 115 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 DHRS12A0PJE2 317 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 PLOD3O60568 738 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 BAG2O95816 211 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 F10P00742 488 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 HMGN2P05204 90 aaKnown RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 ARAFP10398 606 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 SOX18P35713 384 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 CD97P48960 835 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 MRPS35P82673 323 aaKnown RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 CDK6Q00534 326 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 SLC34A1Q06495 639 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 MGAT2Q10469 447 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 SCARB2Q14108 478 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 SERTAD2Q14140 314 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 FHL5Q5TD97 284 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 IRAK1BP1Q5VVH5 260 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 PLAG1Q6DJT9 500 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 TCTN3Q6NUS6 607 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 SLC30A8Q8IWU4 369 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 ADGRG5Q8IZF4 528 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 OR2L13Q8N349 312 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 ZNF321PQ8N8H1 164 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 C7orf57Q8NEG2 295 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 NFAM1Q8NET5 270 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 MIPOL1Q8TD10 442 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 CANT1Q8WVQ1 401 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 PSMF1Q92530 271 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 POP5Q969H6 163 aaKnown RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 SLCO4A1Q96BD0 722 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 RBM18Q96H35 190 aaKnown RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 DGAT2Q96PD7 388 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 PELOQ9BRX2 385 aaKnown RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 OR51I1Q9H343 314 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 A4GALTQ9NPC4 353 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 CCM2LQ9NUG4 571 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 DCAF13Q9NV06 445 aaKnown RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 MAT2BQ9NZL9 334 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 TUBD1Q9UJT1 453 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 ANAPC2Q9UJX6 822 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 PCDHGA9Q9Y5G4 932 aaKnown RBP16.11■□□□□ 0.17
HDAC7-227ENST00000548080 SPTA1P02549 2419 aa16.11■□□□□ 0.17
HDAC7-227ENST00000548080 HMGN4O00479 90 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 MAN1A2O60476 641 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 C1QL1O75973 258 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 OR12D1P0DN82 309 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 TNNI3P19429 210 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 PSMA4P25789 261 aaKnown RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 KDELR2P33947 212 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 STT3AP46977 705 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 SOX8P57073 446 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 MAP4K2Q12851 820 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 LASP1Q14847 261 aaKnown RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 TRMT12Q53H54 448 aaKnown RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 EID3Q8N140 333 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 NFKBIDQ8NI38 313 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 PTPMT1Q8WUK0 201 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 RAB8BQ92930 207 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 CTHRC1Q96CG8 243 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 C16orf58Q96GQ5 468 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 MS4A4EQ96PG1 132 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 ACTRT3Q9BYD9 372 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 ANKRA2Q9H9E1 313 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 ADAP2Q9NPF8 381 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 OLAHQ9NV23 265 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 LUZP4Q9P127 313 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 CSAG2Q9Y5P2 127 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 CNTRLQ7Z7A1 2325 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 CFAP46Q8IYW2 2715 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 EIF4E1BA6NMX2 242 aaKnown RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 C17orf105B2RV13 164 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 HRKO00198 91 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 SERPINA1P01009 418 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 GALNSP34059 522 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 ELAVL1Q15717 326 aaKnown RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 EXT1Q16394 746 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 INTS11Q5TA45 600 aaKnown RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 AGAP7PQ5VUJ5 663 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 GALNT12Q8IXK2 581 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 M1APQ8TC57 530 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 THAP3Q8WTV1 239 aaPredicted RBP16.1■□□□□ 0.17
HDAC7-227ENST00000548080 RIT1Q92963 219 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 GIMAP5Q96F15 307 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 AGAP4Q96P64 663 aa16.1■□□□□ 0.17
HDAC7-227ENST00000548080 SMAD5Q99717 465 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms