RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ZNF195O14628 629 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 ICOSLGO75144 302 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 GABRA3P34903 492 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 PTGS2P35354 604 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 MAP3K8P41279 467 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 MASP1P48740 699 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 PNLIPRP2P54317 469 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 SNTA1Q13424 505 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 EFR3AQ14156 821 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 LSM12Q3MHD2 195 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 SLC30A6Q6NXT4 461 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 MAVSQ7Z434 540 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 SPATA19Q7Z5L4 167 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 PSMA8Q8TAA3 256 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 TMEM41AQ96HV5 264 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 C7orf26Q96N11 449 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 MS4A4EQ96PG1 132 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 PSMG3-AS1Q96PY0 264 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 OSBPL11Q9BXB4 747 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 GALNT9Q9HCQ5 603 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 ZNF446Q9NWS9 450 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 KLRF1Q9NZS2 232 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 B4GALT7Q9UBV7 327 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 SNX8Q9Y5X2 465 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 DNAJC13O75165 2243 aa17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 NUP214P35658 2090 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-206ENST00000547764 PTPN13Q12923 2485 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 FLNBO75369 2602 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 C2orf72A6NCS6 295 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 PRAMEF25A6NGN4 478 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 PER3P56645 1201 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 WNT3P56703 355 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 PRR5P85299 388 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 DECR1Q16698 335 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 SLC9B1Q4ZJI4 515 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 OR4F3Q6IEY1 312 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 MFSD12Q6NUT3 480 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 TRILQ7L0X0 811 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 DOLPP1Q86YN1 238 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 CDRT4Q8N9R6 151 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 FAM57AQ8TBR7 257 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 DYDC1Q8WWB3 177 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 C16orf58Q96GQ5 468 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 MAELQ96JY0 434 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 GNRHR2Q96P88 292 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 CXorf36Q9H7Y0 433 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 SLCO1B3Q9NPD5 702 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 ZCCHC3Q9NUD5 404 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 INTS9Q9NV88 658 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 AIG1Q9NVV5 245 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 QPCTLQ9NXS2 382 aa17.13■□□□□ 0.33
PRPF40B-206ENST00000547764 USP9YO00507 2555 aaPredicted RBP17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 NCKAP5O14513 1909 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 ASH1LQ9NR48 2969 aaKnown RBP17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 A0A1B0GVC2 190 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 GXYLT2A0PJZ3 443 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 PRRG2O14669 202 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 GNB5O14775 395 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 CFLARO15519 480 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 NKX2-2O95096 273 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 TPOP07202 933 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 ACP2P11117 423 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 CYP4B1P13584 511 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 GDF1P27539 372 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 CCT3P49368 545 aaKnown RBP17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 NME5P56597 212 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 HBA1P69905 142 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 MRPS22P82650 360 aaKnown RBP17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 VPS26BQ4G0F5 336 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 TIGD3Q6B0B8 471 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 NXNQ6DKJ4 435 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 ANGPTL8Q6UXH0 198 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 CLECL1Q8IZS7 167 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 SLC16A11Q8NCK7 471 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 OR8J2Q8NGG1 315 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 FBXO30Q8TB52 745 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 GPR151Q8TDV0 419 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 PIK3R3Q92569 461 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 SLC9A6Q92581 669 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 TESCQ96BS2 214 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 TEX37Q96LM6 180 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 YIPF4Q9BSR8 244 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 UBQLN3Q9H347 655 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 LDAHQ9H6V9 325 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 NEUROD4Q9HD90 331 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 ACKR4Q9NPB9 350 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 C15orf41Q9Y2V0 281 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 GPR45Q9Y5Y3 372 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 USH1CQ9Y6N9 552 aa17.12■□□□□ 0.33
PRPF40B-206ENST00000547764 SPTAN1Q13813 2472 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 DOPEY1Q5JWR5 2465 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 HECTD1Q9ULT8 2610 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 TRGV5A0A0B4J1U4 118 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 NPIPA2E9PIF3 369 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 NPIPA3F8WFD2 350 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 RNASET2O00584 256 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 SNPHO15079 494 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 SUSD5O60279 629 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 ZG16O60844 167 aa17.11■□□□□ 0.33
PRPF40B-206ENST00000547764 IL33O95760 270 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms