RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	EIF2B2	P49770	351 aa	Known RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	HLCS	P50747	726 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	GPR143	P51810	404 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	BMX	P51813	675 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	SLC26A5	P58743	744 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	PSME3	P61289	254 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ARG2	P78540	354 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	POU4F1	Q01851	419 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	RAB39A	Q14964	217 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	SPCS2	Q15005	226 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ABRAXAS2	Q15018	415 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TSN	Q15631	228 aa	Known RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ATP6AP1	Q15904	470 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	DEFB134	Q4QY38	66 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ACER2	Q5QJU3	275 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TUBA3E	Q6PEY2	450 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	PAPD4	Q6PIY7	484 aa	Known RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	NXPE4	Q6UWF7	544 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	USP51	Q70EK9	711 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	THOC6	Q86W42	341 aa	Known RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	SPPL2C	Q8IUH8	684 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	AQP12A	Q8IXF9	295 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	BEST3	Q8N1M1	668 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ZNF781	Q8N8C0	355 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	APCDD1L	Q8NCL9	501 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TRPV3	Q8NET8	790 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	OR1N1	Q8NGS0	311 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	OR13F1	Q8NGS4	319 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	RAB2B	Q8WUD1	216 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	UBTD2	Q8WUN7	234 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	S100Z	Q8WXG8	99 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	LRTOMT	Q8WZ04	291 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ATP6V1E2	Q96A05	226 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	GAL3ST3	Q96A11	431 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TMEM125	Q96AQ2	219 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	SLCO4A1	Q96BD0	722 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TBC1D20	Q96BZ9	403 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	PEX11G	Q96HA9	241 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	HIST1H2AH	Q96KK5	128 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TSNARE1	Q96NA8	513 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	FRMD6	Q96NE9	622 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	SIGLEC12	Q96PQ1	595 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	OR52B2	Q96RD2	323 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	RBBP8	Q99708	897 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	CPNE1	Q99829	537 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	HIST1H2AJ	Q99878	128 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	VKORC1	Q9BQB6	163 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	H2AFJ	Q9BTM1	129 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	C9orf16	Q9BUW7	83 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	WDR12	Q9GZL7	423 aa	Known RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	KLHL31	Q9H511	634 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	MOV10	Q9HCE1	1003 aa	Known RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	YAE1D1	Q9NRH1	226 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	PLA2G3	Q9NZ20	509 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	GPRC5B	Q9NZH0	403 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TMEM216	Q9P0N5	145 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	C19orf25	Q9UFG5	118 aa	Predicted RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	CD300A	Q9UGN4	299 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ZNF223	Q9UK11	482 aa	Predicted RBP	5.94	□□□□□ -1.46
CIT-213	ENST00000543324	ERVK-11	Q9UQG0	969 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	SLC22A14	Q9Y267	594 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	TSC22D4	Q9Y3Q8	395 aa		5.94	□□□□□ -1.46
CIT-213	ENST00000543324	FREM3	P0C091	2139 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CR1	P17927	2039 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324		A0A087X1B8	175 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324		A0A1W2PPW3	197 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	LRIT2	A6NDA9	550 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	TRPC5OS	A6NMA1	111 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324		H0YAE9	185 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	PLOD2	O00469	737 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CYR61	O00622	381 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	DLGAP1	O14490	977 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CD5L	O43866	347 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	NPHS1	O60500	1241 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CLPX	O76031	633 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	SEC14L2	O76054	403 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	SCEL	O95171	688 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	OXSR1	O95747	527 aa	Predicted RBP	5.93	□□□□□ -1.46
CIT-213	ENST00000543324	BCL10	O95999	233 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	TFPT	P0C1Z6	253 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	SLC35E2B	P0CK96	405 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	C1GALT1C1L	P0DN25	315 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	FCGR1A	P12314	374 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CD1D	P15813	335 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	TFEB	P19484	476 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CCNA2	P20248	432 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	SPR	P35270	261 aa	Predicted RBP	5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CD96	P40200	585 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CASP2	P42575	452 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	GSS	P48637	474 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	RPL14	P50914	215 aa	Known RBP	5.93	□□□□□ -1.46
CIT-213	ENST00000543324	ATP4B	P51164	291 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	DLX5	P56178	289 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	SKP1	P63208	163 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	RGS1	Q08116	209 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	MERTK	Q12866	999 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	STX5	Q13190	355 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	CSHL1	Q14406	222 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	SQLE	Q14534	574 aa		5.93	□□□□□ -1.46
CIT-213	ENST00000543324	OR4D1	Q15615	310 aa		5.93	□□□□□ -1.46

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms