RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, human

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-218	ENST00000541615	STEAP4	Q687X5	459 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	C19orf48	Q6RUI8	117 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	SCIMP	Q6UWF3	145 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	PRSS57	Q6UWY2	283 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	BTNL3	Q6UXE8	466 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	CLEC9A	Q6UXN8	241 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	CASP12	Q6UXS9	341 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	CYP2R1	Q6VVX0	501 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	GCNT7	Q6ZNI0	430 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	QSOX2	Q6ZRP7	698 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TIPARP	Q7Z3E1	657 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	GRINA	Q7Z429	371 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	MAVS	Q7Z434	540 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	LHFPL4	Q7Z7J7	247 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	BIVM	Q86UB2	503 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	IFNE	Q86WN2	208 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	ZNF573	Q86YE8	665 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	PUSL1	Q8N0Z8	303 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	SPIC	Q8N5J4	248 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	RNF148	Q8N7C7	305 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TMEM145	Q8NBT3	493 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	OR52E4	Q8NGH9	312 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	OR6K3	Q8NGY3	331 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	DNAJB8	Q8NHS0	232 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TSEN15	Q8WW01	171 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TFG	Q92734	400 aa	Predicted RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	SLC5A5	Q92911	643 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TADA1	Q96BN2	335 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TM4SF18	Q96CE8	201 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	COQ8B	Q96D53	544 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TRMT61A	Q96FX7	289 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	PEX11G	Q96HA9	241 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	DIRAS2	Q96HU8	199 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	RHOV	Q96L33	236 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	SENP8	Q96LD8	212 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	CXorf58	Q96LI9	332 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	PKMYT1	Q99640	499 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	PRRX2	Q99811	253 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	RTP3	Q9BQQ7	232 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	PIGQ	Q9BRB3	760 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	MXRA8	Q9BRK3	442 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	TMEM43	Q9BTV4	400 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	THUMPD3	Q9BV44	507 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	RUSC1	Q9BVN2	902 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	IL22	Q9GZX6	179 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	OR2AG1	Q9H205	316 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	UBQLN3	Q9H347	655 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	IL1RL2	Q9HB29	575 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	POPDC2	Q9HBU9	364 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	EML4	Q9HC35	981 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	DLL4	Q9NR61	685 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	GTSE1	Q9NYZ3	720 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	SLC17A6	Q9P2U8	582 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	DHCR7	Q9UBM7	475 aa	Known RBP	4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	CACNG4	Q9UBN1	327 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	OPN4	Q9UHM6	478 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	FBXL4	Q9UKA2	621 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	RNF24	Q9Y225	148 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	SLC35A3	Q9Y2D2	325 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	ZFP30	Q9Y2G7	519 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	MMP24	Q9Y5R2	645 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	POMT1	Q9Y6A1	747 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	USP54	Q70EL1	1684 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	ATRNL1	Q5VV63	1379 aa		4.91	□□□□□ -1.62
SNHG1-218	ENST00000541615	CHD4	Q14839	1912 aa		4.9	□□□□□ -1.62
SNHG1-218	ENST00000541615		A0A0D9SG52	128 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	NKX6-3	A6NJ46	265 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	ANXA2P2	A6NMY6	339 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	GJE1	A6NN92	205 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	ZNF587B	E7ETH6	402 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	ATP5J2-PTCD1	G3V325	749 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615		M0R3H8	397 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	GNGT2	O14610	69 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	CDIPT	O14735	213 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	NRP1	O14786	923 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	CASK	O14936	926 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	INPP4B	O15327	924 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	KIAA0513	O60268	411 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	DDAH1	O94760	285 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	PAPLN	O95428	1278 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	CFD	P00746	253 aa	Predicted RBP	4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	GCG	P01275	180 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	FGB	P02675	491 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	SRPRA	P08240	638 aa	Known RBP	4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	ITGA5	P08648	1049 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	NBEAP1	P0C6P0	100 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	OR8U8	P0C7N1	319 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	PRR35	P0CG20	571 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	TFE3	P19532	575 aa	Predicted RBP	4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	LPO	P22079	712 aa	Predicted RBP	4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	PSMA1	P25786	263 aa	Known RBP	4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	ITGB7	P26010	798 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	CD82	P27701	267 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	AGTR1	P30556	359 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	MAS1L	P35410	378 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	SCNN1A	P37088	669 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	CD200	P41217	278 aa		4.9	□□□□□ -1.63
SNHG1-218	ENST00000541615	NAA10	P41227	235 aa	Predicted RBP	4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms