RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ITGAMP11215 1152 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 ITGA2P17301 1181 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 AGXTP21549 392 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 ELAVL4P26378 380 aaKnown RBP11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 GABRA3P34903 492 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 PGDP52209 483 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 HMGA2P52926 109 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 PSG6Q00889 435 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 CD47Q08722 323 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 RAPSNQ13702 412 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 GPR68Q15743 365 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 NNATQ16517 81 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 MEP1AQ16819 746 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 TTC33Q6PID6 262 aaPredicted RBP11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF836Q6ZNA1 936 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 COX15Q7KZN9 410 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 KMT5CQ86Y97 462 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 CDRT4Q8N9R6 151 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 ZSCAN1Q8NBB4 408 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 CHDHQ8NE62 594 aaPredicted RBP11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 OR52P1PQ8NH57 321 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 GPR151Q8TDV0 419 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 PHF10Q8WUB8 498 aaKnown RBP11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 ATOH1Q92858 354 aaPredicted RBP11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 UBE2FQ969M7 185 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 RMND5BQ96G75 393 aaPredicted RBP11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 DGAT2Q96PD7 388 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 GRIP2Q9C0E4 1043 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 ARRDC1-AS1Q9H2J1 176 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 KRT84Q9NSB2 600 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 MAN2C1Q9NTJ4 1040 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 MRPS33Q9Y291 106 aaKnown RBP11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 WDR45Q9Y484 360 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
AP003559.1-201ENST00000540906 DUXAA6NLW8 204 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 DSCR3O14972 297 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 SLC16A6O15403 523 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 NKX2-2O95096 273 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 MSL3P1P0C860 447 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 CKMT1AP12532 417 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 POU2F1P14859 743 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 CBLP22681 906 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 TRHRP34981 398 aaPredicted RBP11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 HOXD12P35452 270 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 HSD17B7P56937 341 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF691Q5VV52 312 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 B3GNT8Q7Z7M8 397 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 LAPTM4BQ86VI4 370 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 MEX3DQ86XN8 651 aaKnown RBP11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 COX18Q8N8Q8 333 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 CEP76Q8TAP6 659 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 GTPBP3Q969Y2 492 aaKnown RBP11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 CNDP2Q96KP4 475 aaKnown RBP11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 VSTM2LQ96N03 204 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 ALPK1Q96QP1 1244 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 DPYSL5Q9BPU6 564 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 CNPPD1Q9BV87 410 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 APMAPQ9HDC9 416 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 KIF17Q9P2E2 1029 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 CTSFQ9UBX1 484 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 C3orf18Q9UK00 162 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 ZNF443Q9Y2A4 671 aaPredicted RBP11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 MYRFQ9Y2G1 1151 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 FAM32AQ9Y421 112 aaKnown RBP11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 R4GN57 208 aa11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 COL27A1Q8IZC6 1860 aaPredicted RBP11.4□□□□□ -0.58
AP003559.1-201ENST00000540906 IGKV3D-11A0A0A0MRZ8 115 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 CLDN4O14493 209 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 BCKDKO14874 412 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 CCNB2O95067 398 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 KCNK2O95069 426 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 BMP10O95393 424 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 CER1O95813 267 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 GASTP01350 101 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 THY1P04216 161 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 IFNA16P05015 189 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 IGFBP1P08833 259 aaPredicted RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 IFI6P09912 130 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ANKRD34CP0C6C1 535 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 FBLP22087 321 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 RPS4Y1P22090 263 aaKnown RBP11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 CNR2P34972 360 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 MPLP40238 635 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 GSSP48637 474 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ARHGDIAP52565 204 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 RAD23AP54725 363 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ISL1P61371 349 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SKP1P63208 163 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 RHAGQ02094 409 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 DSG2Q14126 1118 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 GNA13Q14344 377 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 FGD3Q5JSP0 725 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 TTC23Q5W5X9 447 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 DHRS4L2Q6PKH6 230 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 SHISA6Q6ZSJ9 500 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 THAP5Q7Z6K1 395 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 GPR135Q8IZ08 494 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF615Q8N8J6 731 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 AQP11Q8NBQ7 271 aa11.39□□□□□ -0.59
AP003559.1-201ENST00000540906 ZNF555Q8NEP9 628 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms