RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 CCR6P51684 374 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 CASP6P55212 293 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TPI1P60174 286 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 SPCS3P61009 180 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TWF1Q12792 350 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 CHAF1BQ13112 559 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TTLL9Q3SXZ7 439 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PLK5Q496M5 336 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 LRIF1Q5T3J3 769 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 MZT2AQ6P582 158 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 LYPD4Q6UWN0 246 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 MON1AQ86VX9 555 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ANKRD46Q86W74 232 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 LAS2Q8IYD9 372 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TCEAL8Q8IYN2 117 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TDHQ8IZJ6 230 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ATPAF2Q8N5M1 289 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PXT1Q8NFP0 134 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 OR52J3Q8NH60 311 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 METTL6Q8TCB7 284 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PIH1D2Q8WWB5 315 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 FBXO32Q969P5 355 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 NT5C3BQ969T7 300 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TCEAL7Q9BRU2 100 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 FN3KQ9H479 309 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 CLMPQ9H6B4 373 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 SERHLQ9NQF3 203 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 IMP3Q9NV31 184 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TAS2R3Q9NYW6 316 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 MARK1Q9P0L2 795 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 MSRAQ9UJ68 235 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 KIAA1671Q9BY89 1806 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PTPRDP23468 1912 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TMEM200CA6NKL6 621 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 RFXAPO00287 272 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF593O00488 134 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC31A2O15432 143 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TXNL1O43396 289 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 MPZL2O60487 215 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ANXA9O76027 345 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 SOX30O94993 753 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 TBX18O95935 607 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 B3GALT4O96024 378 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PEPDP12955 493 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 UGT2B7P16662 529 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 HMGA1P17096 107 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 CDKN2CP42773 168 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 BPIFB3P59826 476 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 NCF4Q15080 339 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 SSX2Q16385 188 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 GUCA2BQ16661 112 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 GCNT6Q5T4J0 391 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 MEDAGQ5VYS4 303 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 DEF8Q6ZN54 512 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 QSOX2Q6ZRP7 698 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 LGI4Q8N135 537 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PIP4P2Q8N4L2 257 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 GPR26Q8NDV2 337 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 MOGAT1Q96PD6 335 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 C1QTNF3Q9BXJ4 246 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 ALX4Q9H161 411 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 DNAJC27Q9NZQ0 273 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PIPOXQ9P0Z9 390 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 EIF2B4Q9UI10 523 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 GSTK1Q9Y2Q3 226 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 PLEKHM1Q9Y4G2 1056 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 INSL5Q9Y5Q6 135 aa8.93□□□□□ -0.98
CTNNA1-243ENST00000540387 EPOPA6NHQ4 379 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 LCMT2O60294 686 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC19A2O60779 497 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SERPINA3P01011 423 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 APEHP13798 732 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 PPP3CBP16298 524 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 DDX6P26196 483 aaKnown RBP eCLIP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 LAP3P28838 519 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 PTPN6P29350 595 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 RGS4P49798 205 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 RAB8AP61006 207 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 KCNJ10P78508 379 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC3A1Q07837 685 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ERV3-1Q14264 604 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 HABP2Q14520 560 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 MELKQ14680 651 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 UBXN2BQ14CS0 331 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ABRAXAS2Q15018 415 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 VMACQ2NL98 169 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 TMEM44Q2T9K0 475 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 UAP1L1Q3KQV9 507 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF660Q6AZW8 331 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 ELP2Q6IA86 826 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 TMUB2Q71RG4 321 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 TSEN54Q7Z6J9 526 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 DNAJB7Q7Z6W7 309 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 SVBPQ8N300 66 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 RELL2Q8NC24 303 aaPredicted RBP8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 KREMEN2Q8NCW0 462 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 OR9Q2Q8NGE9 314 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 TADA1Q96BN2 335 aa8.92□□□□□ -0.98
CTNNA1-243ENST00000540387 MS4A4EQ96PG1 132 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms