RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 IGHV5-51A0A0C4DH38 117 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 NUDT21O43809 227 aaKnown RBP18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 CPMP14384 443 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 EPHA4P54764 986 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 OLR1P78380 273 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 HPCAP84074 193 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 CHRNEQ04844 493 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 CTF1Q16619 201 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 FAM214AQ32MH5 1076 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 MFSD12Q6NUT3 480 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 PGBD2Q6P3X8 592 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 HMGN2P46Q86SG4 172 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 OR4N5Q8IXE1 308 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 CSNK1A1LQ8N752 337 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 PRRC1Q96M27 445 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 TRIM45Q9H8W5 580 aaPredicted RBP18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 AMBNQ9NP70 447 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 PTGFRNQ9P2B2 879 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 IGHV1OR21-1A0A087WYE8 117 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 ZNF860A6NHJ4 632 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 GABARAPO95166 117 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 ZBTB11O95625 1053 aaPredicted RBP18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 CDK1P06493 297 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 PORP16435 677 aaPredicted RBP18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 CNR2P34972 360 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 TARDBPQ13148 414 aaKnown RBP eCLIP18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 UBE2UQ5VVX9 321 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 CDC73Q6P1J9 531 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 FAM111BQ6SJ93 734 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 PTCHD4Q6ZW05 846 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 NLGN4XQ8N0W4 816 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 OR2L13Q8N349 312 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 ARHGEF39Q8N4T4 335 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 SAP25Q8TEE9 199 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 YIPF6Q96EC8 236 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 SLC35A4Q96G79 324 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 RAB33BQ9H082 229 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 QRSL1Q9H0R6 528 aaKnown RBP18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 EPHA6Q9UF33 1036 aa18.93■□□□□ 0.62
PACSIN3-211ENST00000539589 SH3D21A4FU49 640 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 NME6O75414 186 aaPredicted RBP18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 SLITRK5O94991 958 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 GLB1P16278 677 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 GABRA4P48169 554 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 PODNL1Q6PEZ8 512 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 MCATQ8IVS2 390 aaKnown RBP18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 NR4A3Q92570 626 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 CCDC3Q9BQI4 270 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 POLR2J3Q9H1A7 115 aaKnown RBP18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 CLN6Q9NWW5 311 aa18.92■□□□□ 0.62
PACSIN3-211ENST00000539589 CFIP05156 583 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 NR4A1P22736 598 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 C21orf33P30042 268 aaPredicted RBP18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 PPM1FP49593 454 aaPredicted RBP18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 NUDT6P53370 316 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 AQP6Q13520 282 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 SPCS2Q15005 226 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 HEPHL1Q6MZM0 1159 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 P2RY8Q86VZ1 359 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 OR2I1PQ8NGU4 316 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 TBC1D15Q8TC07 691 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 CAPN10Q9HC96 672 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 H3BN98 237 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 SLC22A1O15245 554 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 MED26O95402 600 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 SP9P0CG40 484 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 CALRP27797 417 aaKnown RBP18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 COX10Q12887 443 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 NR1D2Q14995 579 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 TBCEQ15813 527 aaPredicted RBP18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 NDUFA9Q16795 377 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 WDR53Q7Z5U6 358 aaPredicted RBP18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 STX19Q8N4C7 294 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 Q8N9G6 341 aaPredicted RBP18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 SLC16A11Q8NCK7 471 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 ZBTB44Q8NCP5 570 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 PLGRKTQ9HBL7 147 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 NECTIN3Q9NQS3 549 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 GPR83Q9NYM4 423 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 NLGN3Q9NZ94 848 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 KLHL3Q9UH77 587 aa18.91■□□□□ 0.62
PACSIN3-211ENST00000539589 LY6G6EA0A0G2JKS1 128 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 TLCD2A6NGC4 264 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 M0R129 80 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 TPST2O60704 377 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 GALR3O60755 368 aaPredicted RBP18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 LCKP06239 509 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 PRKAR1BP31321 381 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 CD300LDQ6UXZ3 194 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 VRK2Q86Y07 508 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 OR4K5Q8NGD3 323 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 SLC9A6Q92581 669 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 ZG16BQ96DA0 208 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 TCTN2Q96GX1 697 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 ARHGDIGQ99819 225 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 GAREM1Q9H706 876 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 CACYBPQ9HB71 228 aaKnown RBP18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 MAN2C1Q9NTJ4 1040 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 KLHL28Q9NXS3 571 aa18.9■□□□□ 0.62
PACSIN3-211ENST00000539589 SLC6A14Q9UN76 642 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms