RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 MINDY4Q4G0A6 757 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 PIP5KL1Q5T9C9 394 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 VASNQ6EMK4 673 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 OR8H1Q8NGG4 311 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 NIPAL2Q9H841 368 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 SLC28A3Q9HAS3 691 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 TM7SF3Q9NS93 570 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 AHSPQ9NZD4 102 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 CDH10Q9Y6N8 788 aa19.06■□□□□ 0.64
TMEM260-203ENST00000539559 PROM1O43490 865 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 PI15O43692 258 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 ORC5O43913 435 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 SYPP08247 313 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 ACP5P13686 325 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 TRIM23P36406 574 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 ATP6V1E1P36543 226 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 GPR1P46091 355 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 TAS2R41P59536 307 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 C19orf57Q0VDD7 668 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 MRPL28Q13084 256 aaKnown RBP19.05■□□□□ 0.64
TMEM260-203ENST00000539559 MAB21L1Q13394 359 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 FCN2Q15485 313 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 ENTPD8Q5MY95 495 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 FAM27D1Q5T7N8 215 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 BCL2L15Q5TBC7 163 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 CD200R1LQ6Q8B3 271 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 LIX1LQ8IVB5 337 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 OR4Q3Q8NH05 313 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 ZC3HAV1LQ96H79 300 aaKnown RBP19.05■□□□□ 0.64
TMEM260-203ENST00000539559 MED30Q96HR3 178 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 MKRN2Q9H000 416 aaKnown RBP19.05■□□□□ 0.64
TMEM260-203ENST00000539559 EQTNQ9NQ60 294 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 CXXC1Q9P0U4 656 aaPredicted RBP19.05■□□□□ 0.64
TMEM260-203ENST00000539559 ZFR2Q9UPR6 939 aaKnown RBP19.05■□□□□ 0.64
TMEM260-203ENST00000539559 PTPRSQ13332 1948 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 DENND4CQ5VZ89 1909 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 XIRP2A4UGR9 3374 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 SCO1O75880 301 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 IFNA8P32881 189 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 SRP9P49458 86 aaKnown RBP19.05■□□□□ 0.64
TMEM260-203ENST00000539559 GPR176Q14439 515 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 SLC25A30Q5SVS4 291 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 TIGD3Q6B0B8 471 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 TMEM91Q6ZNR0 172 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 C17orf64Q86WR6 236 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 GHDCQ8N2G8 530 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 IRF7Q92985 503 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 C17orf62Q9BQA9 187 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 SEMA4GQ9NTN9 838 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 MOSPD1Q9UJG1 213 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 WNT6Q9Y6F9 365 aa19.05■□□□□ 0.64
TMEM260-203ENST00000539559 NOS1APO75052 506 aaPredicted RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 ACADLP28330 430 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 NCBP2P52298 156 aaKnown RBP eCLIP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 ERVFC1P60507 584 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 DUSP2Q05923 314 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 SF3A2Q15428 464 aaKnown RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 SDE2Q6IQ49 451 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 ADCK2Q7Z695 626 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 VRK2Q86Y07 508 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 FBXO15Q8NCQ5 510 aaPredicted RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 BADQ92934 168 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 UBE2E3Q969T4 207 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 NACC2Q96BF6 587 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 PRRC1Q96M27 445 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 SECISBP2Q96T21 854 aaKnown RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 KCNJ15Q99712 375 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 PPIL3Q9H2H8 161 aaKnown RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 CLEC4AQ9UMR7 237 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 EXOSC1Q9Y3B2 195 aaKnown RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 IRAK3Q9Y616 596 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 SIRT4Q9Y6E7 314 aaPredicted RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 KIF26AQ9ULI4 1882 aaPredicted RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 A0A0A6YYJ9 748 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 SOCS6O14544 535 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 LCMT2O60294 686 aaKnown RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 CD300LDQ6UXZ3 194 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 TRILQ7L0X0 811 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 UBE3DQ7Z6J8 389 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 AKAP1Q92667 903 aaKnown RBP eCLIP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 DDX31Q9H8H2 851 aaKnown RBP19.04■□□□□ 0.64
TMEM260-203ENST00000539559 STMN3Q9NZ72 180 aa19.04■□□□□ 0.64
TMEM260-203ENST00000539559 OR1F1O43749 312 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 PIP5K1CO60331 668 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 TRHRP34981 398 aaPredicted RBP19.03■□□□□ 0.64
TMEM260-203ENST00000539559 NKAIN4Q8IVV8 208 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.03■□□□□ 0.64
TMEM260-203ENST00000539559 DTD2Q96FN9 168 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 DPH7Q9BTV6 452 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 TRMT61BQ9BVS5 477 aaKnown RBP19.03■□□□□ 0.64
TMEM260-203ENST00000539559 COQ3Q9NZJ6 369 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 LRRK1Q38SD2 2015 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 HEATR5BQ9P2D3 2071 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 SPINT1O43278 529 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 SLC43A1O75387 559 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 PPP2R1BP30154 601 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 ANKRD54Q6NXT1 300 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 C9orf62Q8N4C0 152 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 AMDHD1Q96NU7 426 aa19.03■□□□□ 0.64
TMEM260-203ENST00000539559 SLC38A2Q96QD8 506 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms