RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 TIMP3P35625 211 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 PNLIPRP2P54317 469 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 SRYQ05066 204 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 NSUN5P2Q63ZY6 315 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 CDH24Q86UP0 819 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 TRABD2AQ86V40 505 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 BANPQ8N9N5 519 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 FAM111AQ96PZ2 611 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 MECRQ9BV79 373 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 OR2B2Q9GZK3 357 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 TUBB1Q9H4B7 451 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 DDX18Q9NVP1 670 aaKnown RBP17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 TAS2R10Q9NYW0 307 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 FLRT3Q9NZU0 649 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 SLC17A7Q9P2U7 560 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 KCNN3Q9UGI6 736 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 L3MBTL1Q9Y468 752 aa17.34■□□□□ 0.37
TNFRSF1A-212ENST00000539372 TACC2O95359 2948 aa17.33■□□□□ 0.37
TNFRSF1A-212ENST00000539372 TMEM233B4DJY2 109 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PLOD2O00469 737 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 AKAP10O43572 662 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SCO2O43819 266 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CHRNGP07510 517 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PRPH2P23942 346 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GRK2P25098 689 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 AGFG1P52594 562 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZNF136P52737 540 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GAS1P54826 345 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RPL38P63173 70 aaKnown RBP17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PSPHP78330 225 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 IFFO1Q0D2I5 559 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 HSPB3Q12988 150 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SF3B4Q15427 424 aaKnown RBP eCLIP17.33■□□□□ 0.368e-7■■■□□ 18.2
TNFRSF1A-212ENST00000539372 CES4AQ5XG92 561 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 KANK2Q63ZY3 851 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ARSKQ6UWY0 536 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 Q6ZSR9 355 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZNF551Q7Z340 670 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TMEM200AQ86VY9 491 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 IFNEQ86WN2 208 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TRIM42Q8IWZ5 723 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 OR2L13Q8N349 312 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CIDECQ96AQ7 238 aaPredicted RBP17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ELP4Q96EB1 424 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MKS1Q9NXB0 559 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DKKL1Q9UK85 242 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MED12Q93074 2177 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 KIAA1549Q9HCM3 1950 aa17.33■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CD8B2A6NJW9 211 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 B4DXG7 233 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 H0Y3Z8 333 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SLITRK5O94991 958 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PSMG1O95456 288 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CHEK2O96017 543 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 NUDT17P0C025 328 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SRD5A2P31213 254 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 EVI2BP34910 448 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RFX3P48380 749 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 STARP49675 285 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MRPS22P82650 360 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GAB1Q13480 694 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RCAN2Q14206 197 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 POMZP3Q6PJE2 187 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PLXDC2Q6UX71 529 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RIBC1Q8N443 379 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 C9orf106Q8NAJ2 232 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CLHC1Q8NHS4 586 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RNF138Q8WVD3 245 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 METTL2AQ96IZ6 378 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TSSK3Q96PN8 268 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TUBA1CQ9BQE3 449 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 TRMOQ9BU70 441 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CALHM2Q9HA72 323 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 BAIAP2L1Q9UHR4 511 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CBLCQ9ULV8 474 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RPH3AQ9Y2J0 694 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DNAJC15Q9Y5T4 150 aa17.32■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MBD3L4A6NDZ8 208 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MBD3L3A6NE82 208 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 MBD3L5A6NJ08 208 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 NPIPB8E9PQR5 432 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 PDPK1O15530 556 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZWINTO95229 277 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 NEFHP12036 1026 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CPN1P15169 458 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 SDC1P18827 310 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ASCL1P50553 236 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GFRA1P56159 465 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZNHIT3Q15649 155 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DECR1Q16698 335 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 GALNTL6Q49A17 601 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 CYP27C1Q4G0S4 372 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 RFTN2Q52LD8 501 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZNF385BQ569K4 471 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ARL13AQ5H913 290 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ENPP6Q6UWR7 440 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZCCHC23Q6ZST2 131 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 DDIASQ8IXT1 998 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 ZZZ3Q8IYH5 903 aa17.31■□□□□ 0.36
TNFRSF1A-212ENST00000539372 OR4K17Q8NGC6 315 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms