RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ZNF629Q9UEG4 869 aaPredicted RBP20.2■□□□□ 0.82
SCARB1-206ENST00000539320 H0Y3Z8 333 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 CYP4B1P13584 511 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 PNLIPRP2P54317 469 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 PSG6Q00889 435 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 SLC18A2Q05940 514 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 FBXL19-AS1Q494R0 122 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 CLEC6AQ6EIG7 209 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 NOXRED1Q6NXP6 359 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 IFNEQ86WN2 208 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 ZZZ3Q8IYH5 903 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 RNASE6Q93091 150 aaKnown RBP20.19■□□□□ 0.82
SCARB1-206ENST00000539320 METTL2AQ96IZ6 378 aaKnown RBP20.19■□□□□ 0.82
SCARB1-206ENST00000539320 GLIPR2Q9H4G4 154 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 CALHM2Q9HA72 323 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 TAS2R10Q9NYW0 307 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 DKKL1Q9UK85 242 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 FBXL2Q9UKC9 423 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 C19orf53Q9UNZ5 99 aaPredicted RBP20.19■□□□□ 0.82
SCARB1-206ENST00000539320 CCL27Q9Y4X3 112 aa20.19■□□□□ 0.82
SCARB1-206ENST00000539320 SYT5O00445 386 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 PLOD2O00469 737 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 PSMG1O95456 288 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 CPN1P15169 458 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 PRPH2P23942 346 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 GRK2P25098 689 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 PCLAFQ15004 111 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 SH2D4BQ5SQS7 431 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 POMZP3Q6PJE2 187 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 C10orf107Q8IVU9 208 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 OR4N2Q8NGD1 307 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 ZPLD1Q8TCW7 415 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 SFXN2Q96NB2 322 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 AMDHD1Q96NU7 426 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 MKS1Q9NXB0 559 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 FOXD3Q9UJU5 478 aaPredicted RBP20.18■□□□□ 0.82
SCARB1-206ENST00000539320 PTGDR2Q9Y5Y4 395 aa20.18■□□□□ 0.82
SCARB1-206ENST00000539320 NPIPB8E9PQR5 432 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 SLC28A1O00337 649 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 AZIN1O14977 448 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 NEFHP12036 1026 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 EVI2BP34910 448 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 KIR2DL3P43628 341 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 GFRA1P56159 465 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 SNTB1Q13884 538 aaKnown RBP20.17■□□□□ 0.82
SCARB1-206ENST00000539320 TESK1Q15569 626 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 AAGABQ6PD74 315 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 TRIM42Q8IWZ5 723 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 OR2L13Q8N349 312 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 C9orf106Q8NAJ2 232 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 OR4K17Q8NGC6 315 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 APOPT1Q96IL0 206 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 TUBA1CQ9BQE3 449 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 TRMOQ9BU70 441 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 GATA5Q9BWX5 397 aaPredicted RBP20.17■□□□□ 0.82
SCARB1-206ENST00000539320 IQCGQ9H095 443 aaKnown RBP20.17■□□□□ 0.82
SCARB1-206ENST00000539320 LRTM1Q9HBL6 345 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 C1orf109Q9NX04 203 aa20.17■□□□□ 0.82
SCARB1-206ENST00000539320 UPK1AO00322 258 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 RGS14O43566 566 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 SCO2O43819 266 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 SEC22BO75396 215 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 IFI6P09912 130 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 TACR1P25103 407 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 CTSSP25774 331 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 GAS1P54826 345 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 KIAA0040Q15053 153 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 ZNHIT3Q15649 155 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-206ENST00000539320 CYP27C1Q4G0S4 372 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 OR5M10Q6IEU7 315 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 RIBC1Q8N443 379 aaPredicted RBP20.16■□□□□ 0.82
SCARB1-206ENST00000539320 CCT7Q99832 543 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 Q9N2J8 555 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 CRIM1Q9NZV1 1036 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 PPP4R1LQ9P1A2 415 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 FIS1Q9Y3D6 152 aa20.16■□□□□ 0.82
SCARB1-206ENST00000539320 EEF1E1-BLOC1S5C9J1V9 151 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 EEF1E1O43324 174 aaKnown RBP20.15■□□□□ 0.82
SCARB1-206ENST00000539320 TRIM13O60858 407 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 IL18BPO95998 194 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 TMIGD3P0DMS9 266 aaPredicted RBP20.15■□□□□ 0.82
SCARB1-206ENST00000539320 DPP4P27487 766 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 OPRM1P35372 400 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 DGKQP52824 942 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 SRYQ05066 204 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 FLYWCH1Q4VC44 716 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 RNF165Q6ZSG1 346 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 ELP4Q96EB1 424 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 ZNF764Q96H86 408 aaPredicted RBP20.15■□□□□ 0.82
SCARB1-206ENST00000539320 EGLN2Q96KS0 407 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 FCRL1Q96LA6 429 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 ZFP3Q96NJ6 502 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 CBLCQ9ULV8 474 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 ABCG2Q9UNQ0 655 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 MRPS18CQ9Y3D5 142 aaKnown RBP20.15■□□□□ 0.82
SCARB1-206ENST00000539320 HIVEP1P15822 2718 aa20.15■□□□□ 0.82
SCARB1-206ENST00000539320 ABCA4P78363 2273 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 TLDC2A0PJX2 215 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 CLCA1A8K7I4 914 aa20.14■□□□□ 0.81
SCARB1-206ENST00000539320 C17orf51A8MQB3 221 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms