RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 PRKCDQ05655 676 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 KLHL22Q53GT1 634 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 PERM1Q5SV97 790 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 SLC27A4Q6P1M0 643 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 OR10G6Q8NH81 332 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 TEX47Q8TBZ9 253 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 CDS1Q92903 461 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 COL26A1Q96A83 441 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 LRR1Q96L50 414 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 SIAEQ9HAT2 523 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 CLDND1Q9NY35 253 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 ZNF232Q9UNY5 417 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 C19orf53Q9UNZ5 99 aaPredicted RBP16.76■□□□□ 0.27
GNE-204ENST00000539208 PEX16Q9Y5Y5 336 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 LRP4O75096 1905 aa16.76■□□□□ 0.27
GNE-204ENST00000539208 LOC105369274A0A096LPK9 316 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 LOC102723532A0A0G2JNH3 316 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 TCRBV21S2A2A0A5A6 115 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 IRGMA1A4Y4 181 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 CPSF4LA6NMK7 179 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 AP3D1O14617 1153 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 TNFP01375 233 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 IFI6P09912 130 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 ALOX5P09917 674 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 TRHRP34981 398 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 SOX6P35712 828 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 SOX18P35713 384 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 LTBRP36941 435 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 RABIFP47224 123 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 OMPP47874 163 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 SIM1P81133 766 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 SNAPC1Q16533 368 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 TBC1D25Q3MII6 688 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 PUS10Q3MIT2 529 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 EXOSC6Q5RKV6 272 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 FHL5Q5TD97 284 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 TYW3Q6IPR3 259 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 ZNF730Q6ZMV8 503 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 BCDIN3DQ7Z5W3 292 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 ABI3BPQ7Z7G0 1075 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 OR4N4Q8N0Y3 316 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 CYP4Z2PQ8N1L4 340 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 CLIP4Q8N3C7 705 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 BAHD1Q8TBE0 780 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 PIGXQ8TBF5 258 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 TMEM163Q8TC26 289 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 ACOT11Q8WXI4 607 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 RERGQ96A58 199 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 PRR14Q9BWN1 585 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 PLA2G12AQ9BZM1 189 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 C6orf62Q9GZU0 229 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 SAP130Q9H0E3 1048 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 MMP17Q9ULZ9 603 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 ZNF443Q9Y2A4 671 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 UGT2A1Q9Y4X1 527 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 ISPDA4D126 451 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 SNTNA6NMZ2 147 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 H0YGG7 62 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 FRS3O43559 492 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 GPX5O75715 221 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 OR5F1O95221 314 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 SEMA4FO95754 770 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 RAB36O95755 333 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 CKMT1AP12532 417 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 S100A5P33763 92 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 STAT5AP42229 794 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 RGS8P57771 180 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 ARF3P61204 181 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 UBE2IP63279 158 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 MLLT11Q13015 90 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 C1DQ13901 141 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 ZNF628Q5EBL2 1059 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 RNF44Q7L0R7 432 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 RRM2BQ7LG56 351 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 PEX5LQ8IYB4 626 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 ZNF655Q8N720 491 aaPredicted RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 OR52I1Q8NGK6 324 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 PIGUQ9H490 435 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 EGLN3Q9H6Z9 239 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 CACYBPQ9HB71 228 aaKnown RBP16.75■□□□□ 0.27
GNE-204ENST00000539208 IL21RQ9HBE5 538 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 CPNE7Q9UBL6 633 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 SEC14L4Q9UDX3 406 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 WDR45Q9Y484 360 aa16.75■□□□□ 0.27
GNE-204ENST00000539208 A0A087WV62 115 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 OR5K4A6NMS3 321 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 DNAJB6O75190 326 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 UBXN7O94888 489 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 ATP1B1P05026 303 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 THBS1P07996 1170 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 CDH3P22223 829 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 FPR3P25089 353 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 AVPR1BP47901 424 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 TFF2Q03403 129 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 DUSP8Q13202 625 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 LARS2Q15031 903 aaKnown RBP16.74■□□□□ 0.27
GNE-204ENST00000539208 C3orf38Q5JPI3 329 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 SLC36A4Q6YBV0 504 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 PLEKHG7Q6ZR37 379 aa16.74■□□□□ 0.27
GNE-204ENST00000539208 OR4N5Q8IXE1 308 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms