RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 ANKK1Q8NFD2 765 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 GNPDA2Q8TDQ7 276 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 UPRTQ96BW1 309 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 SLC35G5Q96KT7 338 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 DEPDC7Q96QD5 511 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 ZNF426Q9BUY5 554 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 PRR14Q9BWN1 585 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.49□□□□□ -1.37
PROM1-219ENST00000539194 QRSL1Q9H0R6 528 aaKnown RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 RSPH9Q9H1X1 276 aaPredicted RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 C6orf106Q9H6K1 298 aaPredicted RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 SNTG1Q9NSN8 517 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TMEM74BQ9NUR3 256 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 ASB6Q9NWX5 421 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TVP23BQ9NYZ1 205 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 KCNE5Q9UJ90 142 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 ZMIZ1Q9ULJ6 1067 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 EXOSC1Q9Y3B2 195 aaKnown RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 PCDHGB7Q9Y5F8 929 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 CENPVL1A0A0U1RR11 272 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 KPNA3O00505 521 aaPredicted RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 PLOD3O60568 738 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 CCNKO75909 580 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 MTNR1AP48039 350 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 KHKP50053 298 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 HNRNPA0Q13151 305 aaKnown RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 INSL4Q14641 139 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 CLPPQ16740 277 aaPredicted RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 ARHGAP15Q53QZ3 475 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TYW3Q6IPR3 259 aaKnown RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 VN1R4Q7Z5H5 301 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 C2orf73Q8N5S3 287 aaPredicted RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 SIRT6Q8N6T7 355 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 OR4M1Q8NGD0 313 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 NT5CQ8TCD5 201 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 BRIX1Q8TDN6 353 aaKnown RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 CXorf40AQ8TE69 158 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 OR8D1Q8WZ84 308 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 RNFT2Q96EX2 444 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 SLC35A4Q96G79 324 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TM9SF2Q99805 663 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TIMM29Q9BSF4 260 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TMEM43Q9BTV4 400 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TMEM39AQ9NV64 488 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
PROM1-219ENST00000539194 ACSL5Q9ULC5 683 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 TMCC3Q9ULS5 477 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 ATP11BQ9Y2G3 1177 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 CDH10Q9Y6N8 788 aa6.49□□□□□ -1.37
PROM1-219ENST00000539194 NARSO43776 548 aaKnown RBP6.48□□□□□ -1.37
PROM1-219ENST00000539194 S100A1P23297 94 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 NNMTP40261 264 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 CLDN20P56880 219 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 ABATP80404 500 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 SHC2P98077 582 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 GPAT3Q53EU6 434 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 FAM78AQ5JUQ0 283 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 FAM46CQ5VWP2 391 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 C18orf63Q68DL7 685 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 SLC27A4Q6P1M0 643 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 FAM111BQ6SJ93 734 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 NKAIN4Q8IVV8 208 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 ACOT4Q8N9L9 421 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 OR2L5Q8NG80 312 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 OR2L3Q8NG85 312 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 HSD17B8Q92506 261 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 EXOSC8Q96B26 276 aaKnown RBP6.48□□□□□ -1.37
PROM1-219ENST00000539194 RIPOR3Q96MK2 946 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 CAMK1GQ96NX5 476 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 ENKD1Q9H0I2 346 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 MMP28Q9H239 520 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 SSR3Q9UNL2 185 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 RBMX2Q9Y388 322 aaKnown RBP6.48□□□□□ -1.37
PROM1-219ENST00000539194 AUP1Q9Y679 476 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 ANKRD34BA5PLL1 514 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 TTC36A6NLP5 189 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 FHP07954 510 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 ACRP10323 421 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 HK1P19367 917 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 RAB28P51157 221 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 DEFA1P59665 94 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 DEFA3P59666 94 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 RACK1P63244 317 aaKnown RBP6.48□□□□□ -1.37
PROM1-219ENST00000539194 GALK2Q01415 458 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 CASP12Q6UXS9 341 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 MBOAT2Q6ZWT7 520 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 USP30Q70CQ3 517 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 ADCK2Q7Z695 626 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 VRK2Q86Y07 508 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 SHISA5Q8N114 240 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 MFSD9Q8NBP5 474 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 BBS1Q8NFJ9 593 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 TTLQ8NG68 377 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 GATAD2BQ8WXI9 593 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 PGLYRP3Q96LB9 341 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 MFRPQ9BY79 579 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 PLSCR3Q9NRY6 295 aa6.48□□□□□ -1.37
PROM1-219ENST00000539194 KLHL21Q9UJP4 597 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms