RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SPP2Q13103 211 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RBBP5Q15291 538 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CDKN3Q16667 212 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC40Q4G0X9 1142 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 DCAF12Q5T6F0 453 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ARHGAP11AQ6P4F7 1023 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 KDELC1Q6UW63 502 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 UQCC3Q6UW78 93 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 KDM7AQ6ZMT4 941 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF841Q6ZN19 808 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 KCTD8Q6ZWB6 473 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 FRA10AC1Q70Z53 315 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 PTAR1Q7Z6K3 402 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ITIH5Q86UX2 942 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 GCNT2Q8N0V5 402 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SVOPLQ8N434 492 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TRPV3Q8NET8 790 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 GPRC5AQ8NFJ5 357 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR6M1Q8NGM8 313 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR10G9Q8NGN4 311 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR13C3Q8NGS6 347 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 FAM110BQ8TC76 370 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RAET1EQ8TD07 263 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 GPR151Q8TDV0 419 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RNF139Q8WU17 664 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SELENOMQ8WWX9 145 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 C1orf147Q96MC9 270 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CASD1Q96PB1 797 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NLNQ9BYT8 704 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MRPL37Q9BZE1 423 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 EGLN3Q9H6Z9 239 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 WDR76Q9H967 626 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ADGRL4Q9HBW9 690 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 VAT1LQ9HCJ6 419 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 GPN1Q9HCN4 374 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 PALMDQ9NP74 551 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NGBQ9NPG2 151 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF581Q9P0T4 197 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CTSZQ9UBR2 303 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SH3GLB1Q9Y371 365 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SPECC1L-ADORA2AF8WAN1 911 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NDUFAB1O14561 156 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TRDMT1O14717 391 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CHADO15335 359 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TPST2O60704 377 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF254O75437 659 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 B3GALNT1O75752 331 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 AKR7A3O95154 331 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LCA5LO95447 670 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LALBAP00709 142 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ETS1P14921 441 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 UQCRBP14927 111 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 COX5AP20674 150 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CDH3P22223 829 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 GPX3P22352 226 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 YWHABP31946 246 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CTNNB1P35222 781 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 UGT1A5P35504 534 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 KIR2DS4P43632 304 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 MTIF2P46199 727 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 DNA2P51530 1060 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC8A3P57103 927 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NOP14P78316 857 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CNTN2Q02246 1040 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 HSDL1Q3SXM5 330 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 HSP90AA5PQ58FG0 334 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SPECC1LQ69YQ0 1117 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 Q6ZR54 194 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RFPL4BQ6ZWI9 263 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 UNC5CLQ8IV45 518 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 DND1Q8IYX4 353 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LYG1Q8N1E2 194 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ZCCHC7Q8N3Z6 543 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SPERTQ8NA61 448 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LINC01555Q8NAE3 123 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CHDHQ8NE62 594 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR7G2Q8NG99 324 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OR8J1Q8NGP2 316 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 FBXO25Q8TCJ0 367 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 N4BP2L2Q92802 583 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RPL3LQ92901 407 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SYAP1Q96A49 352 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF707Q96C28 371 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 BPIFA2Q96DR5 249 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OMA1Q96E52 524 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SMARCD1Q96GM5 515 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RPGRIP1Q96KN7 1286 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 C4orf36Q96KX1 117 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 PGLYRP2Q96PD5 576 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 OPALINQ96PE5 141 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 GSDMAQ96QA5 445 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ACCSQ96QU6 501 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ERP44Q9BS26 406 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC35A5Q9BS91 424 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 RHNO1Q9BSD3 238 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC7A5P2Q9GIP4 190 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TUBB1Q9H4B7 451 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 IKZF5Q9H5V7 419 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 S100A14Q9HCY8 104 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 KLHL8Q9P2G9 620 aaPredicted RBP0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms