RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 THBDP07204 575 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 CD8BP10966 210 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 PEPDP12955 493 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 TBXA2RP21731 343 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 CCNG1P51959 295 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 SUCLG1P53597 346 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 IFT88Q13099 833 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 CALCOCO2Q13137 446 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 VEZF1Q14119 521 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 EFR3AQ14156 821 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 PON3Q15166 354 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 BEX5Q5H9J7 111 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 HMBOX1Q6NT76 420 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 PPP4R4Q6NUP7 873 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 METTL4Q8N3J2 472 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 CAVIN3Q969G5 261 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 EFHD2Q96C19 240 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 MRRFQ96E11 262 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 CNRIP1Q96F85 164 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 SLC35A4Q96G79 324 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 BTBD9Q96Q07 612 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 RNF122Q9H9V4 155 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 PFDN4Q9NQP4 134 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF701Q9NV72 531 aaPredicted RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 PPP4R1LQ9P1A2 415 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 PYCARDQ9ULZ3 195 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 SLC12A4Q9UP95 1085 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 MRPS18CQ9Y3D5 142 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 TNPO3Q9Y5L0 923 aaKnown RBP12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF780BQ9Y6R6 833 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 TSPAN2O60636 221 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 C2P06681 752 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 CT45A8P0DMV1 189 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 CT45A9P0DMV2 189 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 PAX1P15863 534 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 HK1P19367 917 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 DSCR4P56555 118 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 CLDN20P56880 219 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 STX5Q13190 355 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 CT45A2Q5DJT8 189 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 MROH9Q5TGP6 573 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 FAM219BQ5XKK7 198 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 KLC3Q6P597 504 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 NPSR1Q6W5P4 371 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 CYS1Q717R9 158 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 CCDC25Q86WR0 208 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 PHC2Q8IXK0 858 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 PTGR2Q8N8N7 351 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 GBP7Q8N8V2 638 aaPredicted RBP12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 FBF1Q8TES7 1133 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 KAT2AQ92830 837 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 PHF21BQ96EK2 531 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 NSUN5Q96P11 429 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 LRRC1Q9BTT6 524 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 DSN1Q9H410 356 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 ELOVL6Q9H5J4 265 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 FARSBQ9NSD9 589 aaKnown RBP12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 UTS2RQ9UKP6 389 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 PSME2Q9UL46 239 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF337Q9Y3M9 751 aa12.6□□□□□ -0.39
SMARCA4-206ENST00000538456 CCDC188H7C350 402 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 HS3ST1O14792 307 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ZSCAN12O43309 604 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 KLF4O43474 513 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF500O60304 480 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 TNFRSF21O75509 655 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 AQP8O94778 261 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ESRRBO95718 433 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 GSTA2P09210 222 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 STX2P32856 288 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 EVI2BP34910 448 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 GAS1P54826 345 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 EEFSECP57772 596 aaKnown RBP12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 GALNT1Q10472 559 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 TRAF3Q13114 568 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 FGFBP1Q14512 234 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ACAP2Q15057 778 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 CLEC12BQ2HXU8 276 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF628Q5EBL2 1059 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 C10orf62Q5T681 223 aaPredicted RBP12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ALKBH2Q6NS38 261 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 WFDC8Q8IUA0 241 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 CCDC116Q8IYX3 515 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 OR2M3Q8NG83 312 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 OR4N2Q8NGD1 307 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 OR9A2Q8NGT5 310 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 TRPC4APQ8TEL6 797 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 TM4SF18Q96CE8 201 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 PLPPR2Q96GM1 343 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF681Q96N22 645 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 HBEGFQ99075 208 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 FAIM2Q9BWQ8 316 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 MED11Q9P086 117 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 LAMP3Q9UQV4 416 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF175Q9Y473 711 aa12.59□□□□□ -0.39
SMARCA4-206ENST00000538456 A0A096LPK6 155 aa12.58□□□□□ -0.4
SMARCA4-206ENST00000538456 KLHL2O95198 593 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms