RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 KLF18A0A0U1RQI7 1052 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 A0A1W2PRB8 838 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 FAM90A10PA6NDY2 464 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 C5orf60A6NFR6 353 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 GAPDHSO14556 408 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 POLR1CO15160 346 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 KERAO60938 352 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 FCGR3BO75015 233 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 CRCPO75575 148 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 CTAG2O75638 210 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 KIAA0754O94854 1291 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 PAK4O96013 591 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 GSRP00390 522 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 PNPP00491 289 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 MT-ND3P03897 115 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 RAF1P04049 648 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ALPPP05187 535 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 PLEKP08567 350 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SNRNP70P08621 437 aaKnown RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 TRIM49P0CI25 452 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 TRIM49CP0CI26 452 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 CDH1P12830 882 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 HLA-DOBP13765 273 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 CTSEP14091 401 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 IRF2P14316 349 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 LBPP18428 481 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 JAK1P23458 1154 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 RPA1P27694 616 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ALDH4A1P30038 563 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 TIA1P31483 386 aaKnown RBP eCLIP3.59□□□□□ -1.833e-6■■■■□ 22.3
SNHG1-203ENST00000537024 MNDAP41218 407 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ACOT2P49753 483 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 NDST2P52849 883 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 DEFA6Q01524 100 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ACTN3Q08043 901 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 DMPKQ09013 629 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SNTA1Q13424 505 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SLC39A14Q15043 492 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SYCP1Q15431 976 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 NPTX1Q15818 432 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 KBTBD12Q3ZCT8 623 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 LBHQ53QV2 105 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 NKAIN2Q5VXU1 208 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SPECC1LQ69YQ0 1117 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ALKBH5Q6P6C2 394 aaKnown RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 TMEM270Q6UE05 265 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 PAQR9Q6ZVX9 377 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 CREB3L2Q70SY1 520 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SCD5Q86SK9 330 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 C17orf82Q86X59 251 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 WDR49Q8IV35 697 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ZADH2Q8N4Q0 377 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 IQCF1Q8N6M8 205 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 BCORP1Q8N888 145 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ZNF557Q8N988 423 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 NPEPL1Q8NDH3 523 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 OR13J1Q8NGT2 312 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 B4GALNT2Q8NHY0 566 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 PSMA8Q8TAA3 256 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 UBLCP1Q8WVY7 318 aaPredicted RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 IRGQQ8WZA9 623 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 TM9SF4Q92544 642 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 RIT1Q92963 219 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SNX21Q969T3 373 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 TMA16Q96EY4 203 aaKnown RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SMARCD1Q96GM5 515 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 SGK494Q96LW2 274 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 MRPL45Q9BRJ2 306 aaKnown RBP3.59□□□□□ -1.83
SNHG1-203ENST00000537024 PANK2Q9BZ23 570 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 MIS12Q9H081 205 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 FKRPQ9H9S5 495 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 MID1IP1Q9NPA3 183 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 MOSPD1Q9UJG1 213 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ACAD8Q9UKU7 415 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 TMED3Q9Y3Q3 217 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 JRKLQ9Y4A0 524 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 ATP8B3O60423 1300 aa3.59□□□□□ -1.83
SNHG1-203ENST00000537024 PCLOQ9Y6V0 5065 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 IGHV1OR21-1A0A087WYE8 117 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 A0A1W2PPK0 400 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 MAGEA13PA6NCF6 341 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 SDR42E2A6NKP2 422 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 E9PI62 339 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 TBL1XO60907 577 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 C9P02748 559 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 CTSLP07711 333 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 UROSP10746 265 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 EPORP19235 508 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 PSMB4P28070 264 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 DEKP35659 375 aaKnown RBP3.58□□□□□ -1.84
SNHG1-203ENST00000537024 GSDMDP57764 484 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 TFAMQ00059 246 aaKnown RBP3.58□□□□□ -1.84
SNHG1-203ENST00000537024 AKAP17AQ02040 695 aaKnown RBP3.58□□□□□ -1.84
SNHG1-203ENST00000537024 TFF3Q07654 80 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 ILF2Q12905 390 aaKnown RBP3.58□□□□□ -1.84
SNHG1-203ENST00000537024 ZBTB17Q13105 803 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 RPA4Q13156 261 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 CA9Q16790 459 aa3.58□□□□□ -1.84
SNHG1-203ENST00000537024 CTU2Q2VPK5 515 aaKnown RBP3.58□□□□□ -1.84
SNHG1-203ENST00000537024 ZNF260Q3ZCT1 412 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms