RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PLXDC2Q6UX71 529 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 LCA5Q86VQ0 697 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GCNT2Q8N0V5 402 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 C16orf78Q8WTQ4 265 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 MTBPQ96DY7 904 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 VSTM2LQ96N03 204 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SFXN2Q96NB2 322 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DACH2Q96NX9 599 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 G6PC3Q9BUM1 346 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PLEKHF2Q9H8W4 249 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 FOLH1BQ9HBA9 442 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SLC35C2Q9NQQ7 365 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SENP1Q9P0U3 644 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CLCF1Q9UBD9 225 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 STK38LQ9Y2H1 464 aa17.85■□□□□ 0.45
TNFRSF1B-204ENST00000536782 CCDC151A5D8V7 595 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PLOD2O00469 737 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 PLOD3O60568 738 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 NME6O75414 186 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ZNF708P17019 499 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ATP5F1P24539 256 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 GRK2P25098 689 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TIA1P31483 386 aaKnown RBP eCLIP17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 MPIP34949 423 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 HTR6P50406 440 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 DIO3P55073 304 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 MRPS22P82650 360 aaKnown RBP17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 OR5M10Q6IEU7 315 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 NPSR1Q6W5P4 371 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SLC22A9Q8IVM8 553 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SLC44A2Q8IWA5 706 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 FAM9CQ8IZT9 166 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 APIPQ96GX9 242 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 SHCBP1LQ9BZQ2 653 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 STMN4Q9H169 189 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 TAS2R9Q9NYW1 312 aa17.84■□□□□ 0.45
TNFRSF1B-204ENST00000536782 ENO1P06733 434 aaKnown RBP17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 FOSL1P15407 271 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DPP4P27487 766 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GCAP28676 217 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GSTM5P46439 218 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PKNOX1P55347 436 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CLDN18P56856 261 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 LCP2Q13094 533 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GALNT18Q6P9A2 607 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GRAMD2AQ8IUY3 354 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 OR7G2Q8NG99 324 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 RNF138Q8WVD3 245 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 EFHD2Q96C19 240 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 BBS4Q96RK4 519 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DLL4Q9NR61 685 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PACSIN3Q9UKS6 424 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 RPH3AQ9Y2J0 694 aaPredicted RBP17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 OR10H1Q9Y4A9 318 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TIMM22Q9Y584 194 aa17.83■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ABCA2Q9BZC7 2435 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SH3D21A4FU49 640 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CASKO14936 926 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ZIC3O60481 467 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 HRGP04196 525 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ABHD2P08910 425 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ANXA4P09525 319 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TCEA1P23193 301 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PRKAA2P54646 552 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 GAS1P54826 345 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 BTKQ06187 659 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 BCL2A1Q16548 175 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 OR4K17Q8NGC6 315 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 OR4N2Q8NGD1 307 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 L3HYPDHQ96EM0 354 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 C11orf24Q96F05 449 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 EBPLQ9BY08 206 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PPP4R1LQ9P1A2 415 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 NDRG3Q9UGV2 375 aa17.82■□□□□ 0.44
TNFRSF1B-204ENST00000536782 A8MXE2 369 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 HCRTR2O43614 444 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 COQ9O75208 318 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DDCP20711 480 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 DSCR4P56555 118 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ZNF155Q12901 538 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 POU4F3Q15319 338 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CHMP1BQ7LBR1 199 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 P4HA3Q7Z4N8 544 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SMPDL3BQ92485 455 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 KCNA7Q96RP8 456 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SIRT5Q9NXA8 310 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ARID1AO14497 2285 aa17.81■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 A0A1W2PNV4 684 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SERTM1A2A2V5 107 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 MYO1GB0I1T2 1018 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 SCO2O43819 266 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TNFSF13O75888 250 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 TGM6O95932 706 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CRHP06850 196 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PEPDP12955 493 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 EVI2BP34910 448 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 CPOXP36551 454 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 PSG6Q00889 435 aa17.8■□□□□ 0.44
TNFRSF1B-204ENST00000536782 ZNF763Q0D2J5 394 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms