RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 GRNP28799 593 aaKnown RBP12.02□□□□□ -0.49
PRKDC-206ENST00000536429 PTPN6P29350 595 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 GABRA3P34903 492 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 MAN2A2P49641 1150 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 SLC18A1P54219 525 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 EIPR1Q53HC9 387 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 CPTPQ5TA50 214 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 AGBL2Q5U5Z8 902 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 TIGD3Q6B0B8 471 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 ZNF787Q6DD87 383 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 TMEM81Q6P7N7 255 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 PAOXQ6QHF9 649 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 SZRD1Q7Z422 152 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 R3HCC1LQ7Z5L2 792 aaKnown RBP12.02□□□□□ -0.49
PRKDC-206ENST00000536429 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 WDSUB1Q8N9V3 476 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 NUP43Q8NFH3 380 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 RNF138Q8WVD3 245 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 PIK3R3Q92569 461 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 COQ8BQ96D53 544 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 MTERF3Q96E29 417 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 C16orf58Q96GQ5 468 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 VKORC1Q9BQB6 163 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 RTN4RQ9BZR6 473 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 ACKR4Q9NPB9 350 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 SERHLQ9NQF3 203 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 ASIC5Q9NY37 505 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 KLRF1Q9NZS2 232 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 NTMQ9P121 344 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 EIF3LQ9Y262 564 aaKnown RBP12.02□□□□□ -0.49
PRKDC-206ENST00000536429 SLC6A5Q9Y345 797 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 NOTCH2Q04721 2471 aa12.02□□□□□ -0.49
PRKDC-206ENST00000536429 CELSR2Q9HCU4 2923 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 A0A1W2PRB8 838 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 SDHDO14521 159 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 SUSD5O60279 629 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 HCN1O60741 890 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 C6orf47O95873 294 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 IFI6P09912 130 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 KITP10721 976 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 ACP2P11117 423 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 H2AFXP16104 143 aaPredicted RBP12.01□□□□□ -0.49
PRKDC-206ENST00000536429 IL12BP29460 328 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 MAP3K8P41279 467 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 RFX3P48380 749 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 GAS1P54826 345 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 CLDN8P56748 225 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 OCRLQ01968 901 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 RTL6Q6ICC9 239 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 OR5M10Q6IEU7 315 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 SLC30A6Q6NXT4 461 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 ZNF585AQ6P3V2 769 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 RPTNQ6XPR3 784 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 MAVSQ7Z434 540 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 GALNT10Q86SR1 603 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 YRDCQ86U90 279 aaKnown RBP12.01□□□□□ -0.49
PRKDC-206ENST00000536429 ZNF808Q8N4W9 903 aaPredicted RBP12.01□□□□□ -0.49
PRKDC-206ENST00000536429 ZFP28Q8NHY6 868 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 NEIL3Q8TAT5 605 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 HOXB13Q92826 284 aaPredicted RBP12.01□□□□□ -0.49
PRKDC-206ENST00000536429 TMCO6Q96DC7 493 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 FAM120BQ96EK7 910 aaKnown RBP12.01□□□□□ -0.49
PRKDC-206ENST00000536429 YIPF4Q9BSR8 244 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 EXO5Q9H790 373 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 CXorf36Q9H7Y0 433 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 MEAF6Q9HAF1 191 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 THAP1Q9NVV9 213 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 QPCTLQ9NXS2 382 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 NKIRAS1Q9NYS0 192 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 NOP53Q9NZM5 478 aaKnown RBP12.01□□□□□ -0.49
PRKDC-206ENST00000536429 B4GALT7Q9UBV7 327 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 FBXL2Q9UKC9 423 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 CBLCQ9ULV8 474 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 FAM215AQ9Y5M1 114 aa12.01□□□□□ -0.49
PRKDC-206ENST00000536429 NAV2Q8IVL1 2488 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 NCKAP5O14513 1909 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 EXPH5Q8NEV8 1989 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 OR14I1A6ND48 311 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 KDM4EB2RXH2 506 aaPredicted RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 BCKDKO14874 412 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 ANKRD28O15084 1053 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 EMC8O43402 210 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 SCO2O43819 266 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 ABCB7O75027 752 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 SNUPNO95149 360 aaKnown RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 HPNP05981 417 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 ALDOCP09972 364 aaKnown RBP12□□□□□ -0.49
PRKDC-206ENST00000536429 PRPS1L1P21108 318 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 KRT20P35900 424 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 DCTP40126 519 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 PNLIPRP2P54317 469 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 WNT3P56703 355 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 C21orf58P58505 322 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 SNTA1Q13424 505 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 EFR3AQ14156 821 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 MLC1Q15049 377 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 DUSP5Q16690 384 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 PGS1Q32NB8 556 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 CYP27C1Q4G0S4 372 aa12□□□□□ -0.49
PRKDC-206ENST00000536429 WIPI1Q5MNZ9 446 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms