RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TAGLN3Q9UI15 199 aa16.1■□□□□ 0.17
NXF1-216ENST00000533499 MRTO4Q9UKD2 239 aaKnown RBP16.1■□□□□ 0.17
NXF1-216ENST00000533499 PCDHGB3Q9Y5G1 929 aa16.1■□□□□ 0.17
NXF1-216ENST00000533499 KCNE3Q9Y6H6 103 aa16.1■□□□□ 0.17
NXF1-216ENST00000533499 PIEZO2Q9H5I5 2752 aa16.1■□□□□ 0.17
NXF1-216ENST00000533499 DUXAA6NLW8 204 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 DPM1O60762 260 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 CBX6O95503 412 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 ESRRAP11474 423 aaPredicted RBP16.09■□□□□ 0.17
NXF1-216ENST00000533499 ETFAP13804 333 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 PPIBP23284 216 aaKnown RBP16.09■□□□□ 0.17
NXF1-216ENST00000533499 TRHRP34981 398 aaPredicted RBP16.09■□□□□ 0.17
NXF1-216ENST00000533499 CD97P48960 835 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 MTPNP58546 118 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 MRPS22P82650 360 aaKnown RBP16.09■□□□□ 0.17
NXF1-216ENST00000533499 CYP27C1Q4G0S4 372 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 COQ5Q5HYK3 327 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 TRPM8Q7Z2W7 1104 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 ARMC10Q8N2F6 343 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 LRRC58Q96CX6 371 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 STACQ99469 402 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 BTBD2Q9BX70 525 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 EXD2Q9NVH0 621 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 LUZP4Q9P127 313 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 TUBD1Q9UJT1 453 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 PCDHGB7Q9Y5F8 929 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 CSAG2Q9Y5P2 127 aa16.09■□□□□ 0.17
NXF1-216ENST00000533499 CFAP47Q6ZTR5 3102 aa16.08■□□□□ 0.17
NXF1-216ENST00000533499 G3V3Y1 287 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 TP53I11O14683 189 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 TO15178 435 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 HS6ST1O60243 411 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 PPM1BO75688 479 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 FBXO45P0C2W1 286 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 CD46P15529 392 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 ATP6V1C1P21283 382 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 DSTNP60981 165 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 HPCAP84074 193 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 GPAT3Q53EU6 434 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 RUNDC3AQ59EK9 446 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 COLEC12Q5KU26 742 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 DESI1Q6ICB0 168 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 RTL4Q6ZR62 310 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 OR10G3Q8NGC4 313 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 OR52N2Q8NGI0 321 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 HAS2Q92819 552 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 NSL1Q96IY1 281 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 ANKRD27Q96NW4 1050 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 COL21A1Q96P44 957 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 SIGLEC12Q96PQ1 595 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 PIF1Q9H611 641 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 TIMMDC1Q9NPL8 285 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 DUSP22Q9NRW4 184 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 GIN1Q9NXP7 522 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 CORO2BQ9UQ03 480 aa16.08■□□□□ 0.16
NXF1-216ENST00000533499 TMEM247A6NEH6 219 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 SLC25A12O75746 678 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 KCNK2O95069 426 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 AGR2O95994 175 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 NR2F1P10589 423 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 SFTPCP11686 197 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 PIGAP37287 484 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 MAN2A2P49641 1150 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 PSMD4P55036 377 aaKnown RBP16.07■□□□□ 0.16
NXF1-216ENST00000533499 SELPLGQ14242 412 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 RGNQ15493 299 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 CYP51A1Q16850 503 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 DCST2Q5T1A1 773 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 IGFL2Q6UWQ7 119 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 LYPD8Q6UX82 237 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 OLIG3Q7RTU3 272 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 PTRH1Q86Y79 214 aaKnown RBP16.07■□□□□ 0.16
NXF1-216ENST00000533499 GPALPP1Q8IXQ4 340 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 DIO2Q92813 273 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 CPPED1Q9BRF8 314 aaPredicted RBP16.07■□□□□ 0.16
NXF1-216ENST00000533499 HES7Q9BYE0 225 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 RNF32Q9H0A6 362 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 IKZF5Q9H5V7 419 aa16.07■□□□□ 0.16
NXF1-216ENST00000533499 TRBV5-3A0A0A0MS03 114 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 HMGN4O00479 90 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 SLC28A2O43868 658 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 UGT2B11O75310 529 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 IGKV1D-16P01601 117 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 P04436 131 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 NUDT7P0C024 238 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 CYP4B1P13584 511 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 NAGAP17050 411 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 HOXB9P17482 250 aaPredicted RBP16.06■□□□□ 0.16
NXF1-216ENST00000533499 MAP3K8P41279 467 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 TNFSF10P50591 281 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 PSPHP78330 225 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 RPP38P78345 283 aaKnown RBP16.06■□□□□ 0.16
NXF1-216ENST00000533499 EFR3AQ14156 821 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 KRT72Q14CN4 511 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 ZNF791Q3KP31 576 aaPredicted RBP16.06■□□□□ 0.16
NXF1-216ENST00000533499 ZNF766Q5HY98 468 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 RABL3Q5HYI8 236 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 GCNT6Q5T4J0 391 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 PRAMEF20Q5VT98 475 aa16.06■□□□□ 0.16
NXF1-216ENST00000533499 SLC22A10Q63ZE4 541 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms