RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 NCCRP1Q6ZVX7 275 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 LARP4Q71RC2 724 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 ZNF808Q8N4W9 903 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 OR7A2PQ8NGA2 310 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 PHF10Q8WUB8 498 aaKnown RBP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 TMCO6Q96DC7 493 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 GNRHR2Q96P88 292 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 DMRTA2Q96SC8 542 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 UBQLN3Q9H347 655 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 TP63Q9H3D4 680 aaPredicted RBP14.06□□□□□ -0.16
CPSF1-210ENST00000532935 EXO5Q9H790 373 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 AKTIPQ9H8T0 292 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 GALNT9Q9HCQ5 603 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 ACKR4Q9NPB9 350 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 PNPOQ9NVS9 261 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 NKIRAS1Q9NYS0 192 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 KLRF1Q9NZS2 232 aa14.06□□□□□ -0.16
CPSF1-210ENST00000532935 CYSRT1A8MQ03 144 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 GNB5O14775 395 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 BCKDKO14874 412 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 LAMP1P11279 417 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 G6PDP11413 515 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 EFNA1P20827 205 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 ENDOUP21128 410 aaKnown RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 ELAVL4P26378 380 aaKnown RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 COL8A1P27658 744 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 SMSP52788 366 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 PNLIPRP2P54317 469 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 ZNHIT3Q15649 155 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 CYP27C1Q4G0S4 372 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 GXYLT1Q4G148 440 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 CPTPQ5TA50 214 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 TIGD3Q6B0B8 471 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 ANGPTL8Q6UXH0 198 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 WDR53Q7Z5U6 358 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 OR5M9Q8NGP3 310 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 OR1J4Q8NGS1 313 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 SARAFQ96BY9 339 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 EFHD2Q96C19 240 aaPredicted RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 LMF2Q9BU23 707 aaKnown RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 SLC6A15Q9H2J7 730 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 EQTNQ9NQ60 294 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 PNPLA3Q9NST1 481 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 ASIC5Q9NY37 505 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 NOP53Q9NZM5 478 aaKnown RBP14.05□□□□□ -0.16
CPSF1-210ENST00000532935 NTMQ9P121 344 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 SPRR3Q9UBC9 169 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 TNFRSF10DQ9UBN6 386 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 CBLCQ9ULV8 474 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 C15orf41Q9Y2V0 281 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 PCNX3Q9H6A9 2034 aa14.05□□□□□ -0.16
CPSF1-210ENST00000532935 C2orf72A6NCS6 295 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 TTC36A6NLP5 189 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 SNPHO15079 494 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 TRAPPC6AO75865 159 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 HPNP05981 417 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 PRPS1L1P21108 318 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 PTPN6P29350 595 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 TRPC1P48995 793 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 PRKAG1P54619 331 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 MRPS22P82650 360 aaKnown RBP14.04□□□□□ -0.16
CPSF1-210ENST00000532935 GAB1Q13480 694 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 ART3Q13508 389 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 MLC1Q15049 377 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 XKRXQ6PP77 449 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 RIMKLAQ8IXN7 391 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 KRTCAP2Q8N6L1 136 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 NUP43Q8NFH3 380 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 NEIL3Q8TAT5 605 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 NUDT8Q8WV74 236 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 COQ8BQ96D53 544 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 PRPF18Q99633 342 aaKnown RBP14.04□□□□□ -0.16
CPSF1-210ENST00000532935 NUF2Q9BZD4 464 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 C3orf14Q9HBI5 128 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 Q9N2J8 555 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 ATAD3AQ9NVI7 634 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 THAP1Q9NVV9 213 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 ACAD8Q9UKU7 415 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 MED12Q93074 2177 aa14.04□□□□□ -0.16
CPSF1-210ENST00000532935 NAV2Q8IVL1 2488 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 MAST4O15021 2626 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 A0A1W2PRB8 838 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 EMC8O43402 210 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 SNNO75324 88 aaPredicted RBP14.03□□□□□ -0.16
CPSF1-210ENST00000532935 CYP4B1P13584 511 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 AGAP20933 346 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 GABRA3P34903 492 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 MAP3K8P41279 467 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 CLDN8P56748 225 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 C21orf58P58505 322 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 TOMM20Q15388 145 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 DECR1Q16698 335 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 ATG16L1Q676U5 607 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 TMEM211Q6ICI0 200 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 ZNF585AQ6P3V2 769 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 SZRD1Q7Z422 152 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 MARVELD2Q8N4S9 558 aa14.03□□□□□ -0.16
CPSF1-210ENST00000532935 NATD1Q8N6N6 113 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms