RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 TAS2R50P59544 299 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF33BQ06732 778 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ASPHQ12797 758 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 MFAP5Q13361 173 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PRICKLE4Q2TBC4 344 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CYP27C1Q4G0S4 372 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 COLEC12Q5KU26 742 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CEP85LQ5SZL2 805 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ABHD17BQ5VST6 288 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 TMEM154Q6P9G4 183 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PAGE2Q7Z2X7 111 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CLNKQ7Z7G1 428 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CROCCP2Q86T23 111 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 GPR180Q86V85 440 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 C10orf107Q8IVU9 208 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 IQCKQ8N0W5 287 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SVOPQ8N4V2 548 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SIRT6Q8N6T7 355 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 RBMXL3Q8N7X1 1067 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 C7orf57Q8NEG2 295 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 M1APQ8TC57 530 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 TCP10LQ8TDR4 215 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SNX33Q8WV41 574 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PSMF1Q92530 271 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PNPLA2Q96AD5 504 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 FAM111AQ96PZ2 611 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 LMF1Q96S06 567 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 HBEGFQ99075 208 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 MAPKAP1Q9BPZ7 522 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 WDR77Q9BQA1 342 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 MRPL1Q9BYD6 325 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLC29A3Q9BZD2 475 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ILKAPQ9H0C8 392 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CENPHQ9H3R5 247 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 GSTO2Q9H4Y5 243 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 RPF2Q9H7B2 306 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 DDX31Q9H8H2 851 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 WDR41Q9HAD4 459 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 KCNK13Q9HB14 408 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZBTB20Q9HC78 741 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 MMP25Q9NPA2 562 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PNO1Q9NRX1 252 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 FARSBQ9NSD9 589 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 LYARQ9NX58 379 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 STMN3Q9NZ72 180 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SENP1Q9P0U3 644 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLC17A7Q9P2U7 560 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PHF11Q9UIL8 331 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SH3BGRL2Q9UJC5 107 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF225Q9UK10 706 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLC12A4Q9UP95 1085 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 B3GNT3Q9Y2A9 372 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PLLPQ9Y342 182 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ATG4BQ9Y4P1 393 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CACNA1GO43497 2377 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 NBEAQ8NFP9 2946 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PCM1Q15154 2024 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 FER1L5A0AVI2 2057 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 TCRBV5S2A0A599 114 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 SAGE2PA6NJ88 616 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 GLOD5A6NK44 160 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 MYO1GB0I1T2 1018 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 J3QKU1 62 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 UBFD1O14562 309 aaKnown RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 PROM1O43490 865 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 TMPRSS11DO60235 418 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 FGF17O60258 216 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 TRIM13O60858 407 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 LDB3O75112 727 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 GBAP04062 536 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 KLK1P06870 262 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 SPARCP09486 303 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 MYZAPP0CAP1 466 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 NR2F6P10588 404 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 COX7A2P14406 83 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 RPS2P15880 293 aaKnown RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 CDH2P19022 906 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 TNNI3P19429 210 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 PPP2R1BP30154 601 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 BUD31P41223 144 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 CD97P48960 835 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 MAPK12P53778 367 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 HNRNPH2P55795 449 aaKnown RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 ARG2P78540 354 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 IL1RL1Q01638 556 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 TNFRSF17Q02223 184 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 CSTF3Q12996 717 aaKnown RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 SERTAD2Q14140 314 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 PCLAFQ15004 111 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 ELAVL1Q15717 326 aaKnown RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 NTRK2Q16620 822 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 PLEKHN1Q494U1 663 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 TCHHL1Q5QJ38 904 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 CCNYL2Q5T2Q4 361 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 B3GNTL1Q67FW5 361 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 C18orf63Q68DL7 685 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 DGAT2L7PQ6IED9 249 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 IGFL2Q6UWQ7 119 aa5.37□□□□□ -1.55
HMGB1P42-201ENST00000532126 LRIG3Q6UXM1 1119 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms