RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 DDCP20711 480 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 KCNJ5P48544 419 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 MRPS15P82914 257 aaKnown RBP12.22□□□□□ -0.45
RBM39-243ENST00000528062 RUNX1T1Q06455 604 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 HSPB3Q12988 150 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 CDK10Q15131 360 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 OCLNQ16625 522 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 RNLSQ5VYX0 342 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 FAM131AQ6UXB0 335 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 TRAPPC5Q8IUR0 188 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 ASCC1Q8N9N2 400 aaKnown RBP12.22□□□□□ -0.45
RBM39-243ENST00000528062 SYT14Q8NB59 555 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 UCN3Q969E3 161 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 APOOQ9BUR5 198 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 C1QTNF7Q9BXJ2 289 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 ACAD8Q9UKU7 415 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 A4GNTQ9UNA3 340 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 KLHL20Q9Y2M5 609 aa12.22□□□□□ -0.45
RBM39-243ENST00000528062 A0A1W2PQL4 384 aaPredicted RBP12.21□□□□□ -0.45
RBM39-243ENST00000528062 CENPXA8MT69 81 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 M0R3H8 397 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 DLL1O00548 723 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 MYL12BO14950 172 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 SSTR4P31391 388 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 AKT2P31751 481 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 MAPK9P45984 424 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 GAS1P54826 345 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 MANFP55145 182 aaKnown RBP12.21□□□□□ -0.45
RBM39-243ENST00000528062 DAB2P98082 770 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 HOXC5Q00444 222 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 LPAL2Q16609 132 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 SYT14P1Q58G82 188 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 ACSM5Q6NUN0 579 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 PODNL1Q6PEZ8 512 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 C6orf120Q7Z4R8 191 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 HMGN2P46Q86SG4 172 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 ZNF547Q8IVP9 402 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 TM9SF4Q92544 642 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 FGF11Q92914 225 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 TM4SF18Q96CE8 201 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 ZNF354BQ96LW1 612 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 FYTTD1Q96QD9 318 aaKnown RBP12.21□□□□□ -0.45
RBM39-243ENST00000528062 NDEL1Q9GZM8 345 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 WDR26Q9H7D7 661 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 TESQ9UGI8 421 aaKnown RBP12.21□□□□□ -0.45
RBM39-243ENST00000528062 NUFIP1Q9UHK0 495 aaKnown RBP12.21□□□□□ -0.45
RBM39-243ENST00000528062 HS3ST3A1Q9Y663 406 aa12.21□□□□□ -0.45
RBM39-243ENST00000528062 HMX3A6NHT5 357 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 SCO2O43819 266 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 GSTM5P46439 218 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 DHPSP49366 369 aaPredicted RBP12.21□□□□□ -0.46
RBM39-243ENST00000528062 ASAH1Q13510 395 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 SYPL1Q16563 259 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 Q5BKY6 102 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 OR2G6Q5TZ20 316 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 ZER1Q7Z7L7 766 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 MEX3DQ86XN8 651 aaKnown RBP12.21□□□□□ -0.46
RBM39-243ENST00000528062 FAM129CQ86XR2 697 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 GALNT12Q8IXK2 581 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 UBE2J2Q8N2K1 259 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 GALNT6Q8NCL4 622 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 OR5P2Q8WZ92 322 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 LRR1Q96L50 414 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 F2RL3Q96RI0 385 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 BEX2Q9BXY8 128 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 RACGAP1Q9H0H5 632 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 RMI1Q9H9A7 625 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 RANGRFQ9HD47 186 aaPredicted RBP12.21□□□□□ -0.46
RBM39-243ENST00000528062 PAQR5Q9NXK6 330 aaPredicted RBP12.21□□□□□ -0.46
RBM39-243ENST00000528062 PILRBQ9UKJ0 227 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 DIMT1Q9UNQ2 313 aaKnown RBP12.21□□□□□ -0.46
RBM39-243ENST00000528062 TMEM98Q9Y2Y6 226 aa12.21□□□□□ -0.46
RBM39-243ENST00000528062 B4DXG7 233 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 CSF2P04141 144 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 MMP11P24347 488 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 SDC2P34741 201 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 NUDT1P36639 197 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 RPS25P62851 125 aaKnown RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 SCN1BQ07699 218 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 NFE2L1Q14494 772 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 PRAMEF14Q5SWL7 426 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 PRAMEF13Q5VWM6 474 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 PEAR1Q5VY43 1037 aaPredicted RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 LYSMD4Q5XG99 296 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 FAM83HQ6ZRV2 1179 aaPredicted RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 Q6ZSR6 202 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 FAM92BQ6ZTR7 304 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 NANOGNBQ7Z5D8 188 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 FAM26EQ8N5C1 309 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 ANKRD53Q8N9V6 530 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 SLC7A6Q92536 515 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 TREX2Q9BQ50 279 aaPredicted RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 ZDHHC5Q9C0B5 715 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 MAN2C1Q9NTJ4 1040 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 SPIN1Q9Y657 262 aaPredicted RBP12.2□□□□□ -0.46
RBM39-243ENST00000528062 PLA2G10O15496 165 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 PDPK1O15530 556 aa12.2□□□□□ -0.46
RBM39-243ENST00000528062 NME6O75414 186 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms