RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SOX1O00570 391 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-208ENST00000527323 RB1P06400 928 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 CDK5Q00535 292 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 LRRC32Q14392 662 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 LIPIQ6XZB0 460 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 B3GLCTQ6Y288 498 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 COMTD1Q86VU5 262 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 DUSP18Q8NEJ0 188 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 OR4F15Q8NGB8 312 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 LMLNQ96KR4 655 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 SLC35G5Q96KT7 338 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 ATF6BQ99941 703 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 TMEM43Q9BTV4 400 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF717Q9BY31 904 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-208ENST00000527323 MKRN2Q9H000 416 aaKnown RBP11.76□□□□□ -0.53
CAPN1-208ENST00000527323 ZCCHC3Q9NUD5 404 aaKnown RBP11.76□□□□□ -0.53
CAPN1-208ENST00000527323 TAS2R7Q9NYW3 318 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 ADAM30Q9UKF2 790 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 FEZF1A0PJY2 475 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 TBC1D3BA6NDS4 549 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 KPNA3O00505 521 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 LZTS3O60299 673 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 TRIM3O75382 744 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 POP7O75817 140 aaKnown RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 HLA-DPB1P04440 258 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 LIMS3P0CW19 117 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 LIMS4P0CW20 117 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 UQCRC1P31930 480 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 CDH11P55287 796 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SF3A2Q15428 464 aaKnown RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF77Q15935 545 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 C2orf27AQ580R0 203 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 IDNKQ5T6J7 187 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 KHDRBS2Q5VWX1 349 aaKnown RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 TECPR1Q7Z6L1 1165 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 FAM109AQ8N4B1 249 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 UCN3Q969E3 161 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ART5Q96L15 291 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 DCLRE1CQ96SD1 692 aaKnown RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ARHGAP9Q9BRR9 750 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 CNIH4Q9P003 139 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 CLEC1BQ9P126 229 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SLC13A4Q9UKG4 626 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 COLQQ9Y215 455 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 PRKAB1Q9Y478 270 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 TRDV1A0A1B0GX56 115 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 MEN1O00255 615 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 LALBAP00709 142 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 GSTM3P21266 225 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 GDI1P31150 447 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 EVI2BP34910 448 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 CLDN20P56880 219 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 TAS2R41P59536 307 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ABATP80404 500 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 C19orf57Q0VDD7 668 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 TNK1Q13470 666 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF791Q3KP31 576 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF767PQ75MW2 155 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ADIPOR2Q86V24 386 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 C17orf64Q86WR6 236 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 CCDC28AQ8IWP9 274 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 AKAP1Q92667 903 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■□□ 18.5
CAPN1-208ENST00000527323 NRTNQ99748 197 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 FGF20Q9NP95 211 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 PTGFRNQ9P2B2 879 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 TAC3Q9UHF0 121 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ACAD8Q9UKU7 415 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ZNF106Q9H2Y7 1883 aaKnown RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 FAM170BA6NMN3 283 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SLC43A1O75387 559 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SOD1P00441 154 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ALPPL2P10696 532 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 FGF9P31371 208 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SLC1A3P43003 542 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ADAM15Q13444 863 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SLC25A30Q5SVS4 291 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 RAET1GQ6H3X3 334 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 C1orf94Q6P1W5 598 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 METAP1DQ6UB28 335 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 WASH2PQ6VEQ5 465 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 CREB3L2Q70SY1 520 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 KIF18BQ86Y91 864 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 LIX1LQ8IVB5 337 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 LINC00471Q8N535 108 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SETD7Q8WTS6 366 aaKnown RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 ASB16Q96NS5 453 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 SIRT3Q9NTG7 399 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 H2AFY2Q9P0M6 372 aaPredicted RBP11.75□□□□□ -0.53
CAPN1-208ENST00000527323 EXTL2Q9UBQ6 330 aa11.75□□□□□ -0.53
CAPN1-208ENST00000527323 PRAMEF27A3QJZ7 478 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 GABRPO00591 440 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 GPR1P46091 355 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 MINDY4Q4G0A6 757 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 ADCK2Q7Z695 626 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 TIGD4Q8IY51 512 aa11.74□□□□□ -0.53
CAPN1-208ENST00000527323 ZC3HAV1LQ96H79 300 aaKnown RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 SENP5Q96HI0 755 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-208ENST00000527323 MARVELD1Q9BSK0 173 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms