RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 TSPAN31Q12999 210 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PDIA2Q13087 525 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SPP2Q13103 211 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 BIKQ13323 160 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 NAE1Q13564 534 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ALCAMQ13740 583 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 CEACAM7Q14002 265 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DGCR6Q14129 220 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 GK2Q14410 553 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DRAP1Q14919 205 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MLC1Q15049 377 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 QPRTQ15274 297 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SIX1Q15475 284 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ZNF239Q16600 458 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PNLIPRP3Q17RR3 467 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC5A12Q1EHB4 618 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DEFB115Q30KQ5 88 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MCMDC2Q4G0Z9 681 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SOWAHCQ53LP3 525 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 CYBRD1Q53TN4 286 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 NHLRC3Q5JS37 347 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 C10orf120Q5SQS8 335 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SYT6Q5T7P8 510 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 FAXCQ5TGI0 409 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 RAP1GAP2Q684P5 730 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 JADE1Q6IE81 842 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ANKRD54Q6NXT1 300 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 HAGHLQ6PII5 290 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ATRAIDQ6UW56 229 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 IL20RBQ6UXL0 311 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 EIF3MQ7L2H7 374 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 G2E3Q7L622 706 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 BHLHA15Q7RTS1 189 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC16A14Q7RTX9 510 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MRPL52Q86TS9 123 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM71AQ8IYT1 594 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SLC22A15Q8IZD6 547 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 GCNT2Q8N0V5 402 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 C1orf52Q8N6N3 182 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 RASGEF1AQ8N9B8 481 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 POGLUT1Q8NBL1 392 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MFSD9Q8NBP5 474 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PAPD5Q8NDF8 572 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SETD9Q8NE22 299 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 C19orf18Q8NEA5 215 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 FAM46DQ8NEK8 389 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 BBS1Q8NFJ9 593 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 OR8D4Q8NGM9 314 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 WDR36Q8NI36 951 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TRMT10AQ8TBZ6 339 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ADAMTS18Q8TE60 1221 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 EXT2Q93063 718 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 HGDQ93099 445 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PABPC5Q96DU9 382 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 MRPL38Q96DV4 380 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 RRNAD1Q96FB5 475 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 LINGO1Q96FE5 620 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 TRMT61AQ96FX7 289 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PIWIL1Q96J94 861 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 C5orf34Q96MH7 638 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 RDH12Q96NR8 316 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 NEDD4LQ96PU5 975 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ORAI2Q96SN7 254 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ACE2Q9BYF1 805 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SRRQ9GZT4 340 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DCSTAMPQ9H295 470 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 FN3KQ9H479 309 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 RIBC2Q9H4K1 309 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 IL1RAPQ9NPH3 570 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ENTPD7Q9NQZ7 604 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ASAH2Q9NR71 780 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 RNF146Q9NTX7 359 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SERTAD4Q9NUC0 356 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PRMT7Q9NVM4 692 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 SMPD3Q9NY59 655 aaPredicted RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 NLGN3Q9NZ94 848 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 DUX4Q9UBX2 424 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 INTS6Q9UL03 887 aaKnown RBP3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 RPH3ALQ9UNE2 315 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 GPR34Q9UPC5 381 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 CDYLQ9Y232 598 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 PLEKHA6Q9Y2H5 1048 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 C3P01024 1663 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 ADAMTSL3P82987 1691 aa3.48□□□□□ -1.85
CLNS1A-209ENST00000527299 NRKQ7Z2Y5 1582 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A087X0M5 115 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 A0A1B0GX30 115 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 GSAPA4D1B5 854 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 AQP12BA6NM10 295 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 WASHC1A8K0Z3 465 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TRDCB7Z8K6 153 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 E9PI62 339 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 NPIPA2E9PIF3 369 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 TSTD3H0UI37 97 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 BLOC1S5-TXNDC5H3BN57 136 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 M0QYT0 321 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 QSOX1O00391 747 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 NEMP1O14524 444 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 PDCD5O14737 125 aa3.47□□□□□ -1.85
CLNS1A-209ENST00000527299 ADAMTS3O15072 1205 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms